| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54873 |
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| Symbol | |
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| ID | 7203528 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | - |
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| Start bp | 541333 |
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| End bp | 543154 |
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| Gene Length | 1822 bp |
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| Protein Length | 404 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | metacaspase |
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| Protein accession | XP_002182706 |
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| Protein GI | 219124847 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTTTGC CGTTTAGATC CGTGTTGCTG CTGGTAGGTA TGACAATGCT CACAGGTTGA
CTGTTTGAAT AGGATTAACA AAGGTAGCTA GAGTATGGAA CGTCGACACG ACGAACAGAT
CGATTCTGGT TCCTTTGCGA GTCTCCGCAT ATTTGATCGA AACTTGAAAG TGGAACACCA
AAAAAGGCAC TGGTCGACTT ATTTAGCTTT TGTTTACAAC ATTTCTTTTA GAAATTCGGT
ACCGCGCGGG ATTGGTGCGT CGCAGGCAGG CAATACGCTT TTACCGACAA GACGAATCTT
CCGAAGCCGG AACGGCGAAA CAGCTGGGTA TCTTTGCCGA AAAAGATCTT GTGCCACACT
ACTGCATTGC CACTCTCTTG ACACACAATT TCAGTCGCTG TATTTCCAGA ACACGCGAAA
TACGCACCGT TAAACACTTC GATATACCGC AATTTCGATC CAGACATGGG TTTCCTTCGC
CGCCAGTTAC GTGAGCAATT TGAAAAGAAG AAGCCGGAGG CACTCCAGGC CGACATCCGC
ATGATCTCGG GCTGTCAGGA TGTTCAAACC AGCGCCGACG TTTCCAACGT GTCTTCCTTT
CAGCTTCCGG ATCCGGCTGG TAACGCTGGT GGTGCTTGCA CTTCTACCCT CTTAAACGTG
CTCTACAAGG ATCACCAGAC TCCGGAAGAT ACTATGTCTT TTGTGGAACT TCTGAACAAG
ATGCGAGAAA ATTTGGAAGC CAAGGGGTTT TCCCAAGTTC CTCAGGTGAG AGTCCGCAAG
CGCATTTGAC AAGTACGTCG TTTCCGCATC GTCTGTCTGT TTCACTCACA TTCGCACTTC
ACAATTTACG ATCCGCAGCT AACCGCGTCG CATCCCATTG ATGTGAACGA TGACTTTGAC
TTGGTCCCTC CTGCTGCGAC GGGCACGCGC CGGGCCCTCT TGATCGGTAT CAACTACGTT
GGACACGAAC AGGGTGTCTT GAGAGGTTGC CATAACGACG TCAAGAATAT GGTGGAATAC
ATCAAGGCTG TTCATGGCTT TGAAGACGAG AACATTACCA TTCTCATGGA CGATGGGGAG
CACACTGCCC CAACACATGC AAACATGATT GCGGCCTATA AGAAAATTGT CGCTCTCAGC
AAAGCTGATG ATGCGCTCTT TTGTCACTTT TCCGGTACGT TGAAGCTGGA AGCTGGAATG
ACTCCCAAAA TCCTTGTGGA GTATCGGATG ACTCACACAC TATATCCATC TTTCTTTATA
GGTCACGGAG CCAAAATTCG CGACGACGAC CGTGGTGAAG AAGACGATGG CTATGACGAA
ACCCTGGTTC CAATTGATTA CCACGAAAAC GGTATGATCC GTGACGACGA TCTCTACGAT
ATTCTTATCA AGCCGTTGGT TCAAGGTGTC CACTTGGTTT GGTATGTATT ACTTCACTTG
ATGATAACCT TCCGATGCAC CAACTATTGC CGCCTGGTAC TCACACGCAA CCTCGGTCTT
TTCTCAGCTT GATGGATTGT TGCCATAGCG GAACGGTCCT GGACCTTCCC TACGTGTACA
AGGCCGACGG AAACTTTACA GAAATGGAAA TTGACGAAAA CTTTGACTTC AAGAAGCTTC
TTGGGAAGTT TGGAATAGAC GACTTTGACA AGTTTGGAGG AGAAGCTCTT GGTAAAATAA
ACGGAGATGC TCTCGGCAAA GTTGGTAAAG ACGCGCTCGG CAAGCTCAAC AAATTTTTCG
GTTGAGTGTT AGTATTAGAT TCAAATACGA GTGCTGCACA TCAGAATGAA AGTTAAGGAT
ATAGATGGAT TTACTTTCAC TA
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| Protein sequence | MCLPFRSVLL LVEIRYRAGL VRRRQAIRFY RQDESSEAGT AKQLGIFAEK DLVPHYCIAT
LLTHNFNMGF LRRQLREQFE KKKPEALQAD IRMISGCQDV QTSADVSNVS SFQLPDPAGN
AGGACTSTLL NVLYKDHQTP EDTMSFVELL NKMRENLEAK GFSQVPQLTA SHPIDVNDDF
DLVPPAATGT RRALLIGINY VGHEQGVLRG CHNDVKNMVE YIKAVHGFED ENITILMDDG
EHTAPTHANM IAAYKKIVAL SKADDALFCH FSGHGAKIRD DDRGEEDDGY DETLVPIDYH
ENGMIRDDDL YDILIKPLVQ GVHLVCLMDC CHSGTVLDLP YVYKADGNFT EMEIDENFDF
KKLLGKFGID DFDKFGGEAL GKINGDALGK VGKDALGKLN KFFG
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