| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54872 |
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| Symbol | |
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| ID | 7203526 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | + |
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| Start bp | 534109 |
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| End bp | 535693 |
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| Gene Length | 1585 bp |
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| Protein Length | 322 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | metacaspase |
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| Protein accession | XP_002182552 |
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| Protein GI | 219124525 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAATATGTCG AACTATTTGG AACGCGCCGA AGAACTTATT CCCGCCGAAG TCCGGATGAT
TTCGGGATGT CGCGACGAAC AAACGAGTGC GGATGTGTCG AACGTCGCGT CGTTCTCTTT
GCCCGACCCC GCGGGTAGCG CCGGTGGGGC CTGTACGTCC GCCATGCTGA AGGTGCTGTA
CGCGAATCAC AAGGCCCCCC AAAAGGATCT ATCCTTTCAA GAAGTCTTGA TGAAGATGCG
GGGTATTCTC TCGCAGGGTC GATACACGCA GATTCCCCAA TTGTCGAGTT CGCGGCCACT
CGATATCCAC CAGAGCTTCA ACATTGTGCC GGCAAACTTC ACTGGTACCC GTCGAGCTGT
CATGATTGGA ATTAACTATA CTGGTAAGAT CGGCAACATG CCTGGCCACT CGTTGCTGTT
TTATGTGAAA TGCAAATCGT GCGCCGTACC CTGTTTACCG TTCTTCACCA TCCTTTTCCA
TTTCTACAAT AGGCCAGCAA GGACAGCTCA GTGGATGCCA TAATGACGTC AAAAATATGG
TGCGTACATC AAGTTGGTGT CTGTGTAAGC ATTGATTCGA TACTTACACG AAAGTCTTAC
TCATGCATTC TCGTTTCGTC TACATTGGCT CACTGTAGAT TGAATTCATA AAGGATATTC
ATGGCTTTGA GGATGAGAAC ATTACCATTC TCATGGACGA CGGAGCGCAT ACGGAGCCTA
CTTACAAAAA CATTTTGGCA GCTTATCATG AATTAGTTTC TTCCGCGAAA GCTGGCGATG
CTATTTTTTG CCACTATTCC GGTAGGTCTG GATTCAGTCC GCCGCCATAA CACATATTCT
TAGCCACTGA CATATCTCTC CACTTTCCCG CAGGACACGG TGGCAAGGTT CGCGATGACG
ATGGCGATGA AGCAGATGGA TACGATGAAA CACTTGTTCC TGTAGATTTC AATGCGGCGG
GTCAAATTCG CGACGATGAT ATCTTTTCAG CTTTGATCGG ACCCATGCCG GCGGGTGTGA
CACTGACGGT ACGTAGCTTC TTAATTATTC TGTGGAAGCT TCGAAAAGGT GTGTTTGTGG
CCCGCGCCTC TAACAAGTTA TGCTCTATCT TTGCTTTTCG TTACGCGTGT TAGTCGGTCA
TGGATTGCTG TCATTCTGGA ACTGTCTTGG ACTTGCCCTA CGTCTTTAAG GCCGACGGTG
AACAGAATCA GATGGCGCCA CCTCCGGATT TTGACTTCTC CAAACTGGCA GCGATGTTTC
AAGCGTACAT GGTCCAACAG GGCGCCAATG GCCAGGGTGG TATAGACCCG AACGATGCTA
TTGCCATTGT TGCAAAAGAG TGTTGCAACA TTTTGTAACA AGACAACCCG TGAGATTTCC
GTTACGTGAA AATTGATGTA ATAGTGTTAT GACGCGACGA TTGTGAAAGC GCGAAAAACT
GCGAAGCAAG GCGCTCTTTC AAAAAAGGAT AGCAGCTTTG AGCGAACAAG ACAGCTAGGC
GGCGTTGGAA GTATTTGATG TGACAAAGTT ACGCAGGCGG TTATATTAGT GAGAGGCTGT
CTGCTTATAA GTTTTATCTG TTTTG
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| Protein sequence | MSNYLERAEE LIPAEVRMIS GCRDEQTSAD VSNVASFSLP DPAGSAGGAC TSAMLKVLYA
NHKAPQKDLS FQEVLMKMRG ILSQGRYTQI PQLSSSRPLD IHQSFNIVPA NFTGTRRAVM
IGINYTGQQG QLSGCHNDVK NMIEFIKDIH GFEDENITIL MDDGAHTEPT YKNILAAYHE
LVSSAKAGDA IFCHYSGHGG KVRDDDGDEA DGYDETLVPV DFNAAGQIRD DDIFSALIGP
MPAGVTLTSV MDCCHSGTVL DLPYVFKADG EQNQMAPPPD FDFSKLAAMF QAYMVQQGAN
GQGGIDPNDA IAIVAKECCN IL
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