Gene PHATRDRAFT_5467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5467 
Symbol 
ID7203380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand- 
Start bp728621 
End bp729190 
Gene Length570 bp 
Protein Length190 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182750 
Protein GI219124939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000081806 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACGCCACCA AAGCAATTCG ACGACTATTG TCAAAGGAAC GAAACCCACC TGTTGTCCAG 
GTAATTCGAT CGGGAATTAT CTCTTTTTTG GTACGATTCT TGCAGGAGGA CAAAACTGAC 
GCTCCACGTT TGCAGTTTGA ATCGGCATGG GCACTCACGA ACATTGCTTC AACAAGTCGG 
ACATCGGATG TGGCCCATAG TGGTGCCATC CCACATTTGG TCCGTATTAT CAATCATGCA 
GACTCAGCGG AGCTTCGTGA GCAAGCTGCT TGGTGCATTG GAAATGTGGC TGGAGACTCC 
ATTGAGAACC GAGATGGTCT CCTTGCCACG CCGATGTTGA CCAACGGTAT GTTGAAAAAT 
ATATCTCGTC CAGCGAACCT CTCGCTACTG CAGAACTTTA CCTGGGCAAT TTCCAATTTA 
TGTCGATTTA AACCATCTCC CGATTTTGGT GCTGTTGCTC CTTTTATAAG TGCATTGGTA 
AACATTCTCA ATGAAGTTGA GAATGGTGTC GGTGCCGAAA GCGCCGTAGA CCTACAGACG 
GACACACTCT GGGCGCTATC GTACTTATCG
 
Protein sequence
DATKAIRRLL SKERNPPVVQ VIRSGIISFL VRFLQEDKTD APRLQFESAW ALTNIASTSR 
TSDVAHSGAI PHLVRIINHA DSAELREQAA WCIGNVAGDS IENRDGLLAT PMLTNGMLKN 
ISRPANLSLL QNFTWAISNL CRFKPSPDFG AVAPFISALV NILNEVENGV GAESAVDLQT 
DTLWALSYLS