Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_5465 |
Symbol | |
ID | 7203523 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 512631 |
End bp | 513534 |
Gene Length | 904 bp |
Protein Length | 234 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182701 |
Protein GI | 219124837 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.515591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGCCCACACT ACGATCGCAA ATGTACCATG ATTGCTCCCT GCTGTGGAGC CGCCTTTGGG TGTCGTATCT GTCACGATGA TTGTCCCATT CTCCCACCCA AAATTAGTGT AGGACGTCGC TTTCATCGAT CCGCATCCCT CCCGAGCTCA TTTACCTTTA TGGAAACGTC TCAACCGGAA GACACGCACC ACGCAATTGA TCGTTTTGCG GTCCAGGAAG TAATTTGTCG AGAATGCTTT ACCAGGCAAT CGAGTAGAAC GTAAGCTTAC TCGTCCCTAG AAAGAAATGC GGAGAAAAAA AGCTCAAACC TCTGATACTC TACCCGGGTA CTCACACGCA TTGCCCTCAC CCGTCTTTCA CAGGAACCAC TGTATCAACT GCAGTGTACA ATTCGGCGCC TATCATTGCA ACATTTGCAA CCTGTGGATG TCGGACGAAG AGCGTCCCTA CCACTGTGAA GACTGTGGCT TCTGCCGCGT GGGTGGCGCC GAAAGCTTTC TGCATTGCCA CGATTGTGGT ATGTGCATCG ACAAGAACTT GTATGACAAT CACAATTGCA AGTCCGGAAA ATACAAATCC AACTGTCCCG TTTGTCAAGA ATATCTCTTT TCGTCGCGCT CGGCATCGCA CGAAATGCCC TGTGGACACG CCATTCATTG GGACTGCTTT CGGCAGCTTG CCGCTCACGA TAGCCGCTGC CCCGTTTGTA AAAAGACGGC CGAGACGCGG GAAAGAATGA TGCCGACATG GTCCTGTATG GCGTCGAACA TAGCCATGCA ACCCATCCCC CCCGAACTCT CGCGGGTCGT TAATATTACC TGTAACGATT GTGAGCAACG ACAGGATGCT CGGGCTTGGC ACTTTTTGGG AATTCAGTGT CACACTTGTT CCAGTTTCAA TACA
|
Protein sequence | CPHYDRKCTM IAPCCGAAFG CRICHDDYTH HAIDRFAVQE VICRECFTRQ SSRTNHCINC SVQFGAYHCN ICNLWMSDEE RPYHCEDCGF CRVGGAESFL HCHDCGMCID KNLYDNHNCK SGKYKSNCPV CQEYLFSSRS ASHEMPCGHA IHWDCFRQLA AHDSRCPVCK KTAETRERMM PTWSCMASNI AMQPIPPELS RVVNITCNDC EQRQDARAWH FLGIQCHTCS SFNT
|
| |