| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_52343 |
|---|
| Symbol | ZIP1 |
|---|
| ID | 7203428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011684 |
|---|
| Strand | - |
|---|
| Start bp | 119384 |
|---|
| End bp | 120527 |
|---|
| Gene Length | 1144 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | iron permease 1 |
|---|
| Protein accession | XP_002182619 |
|---|
| Protein GI | 219124665 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0298528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCG GGCTTGTTAT CGGCGCCGGG GCGGCTACGG GTCTTGGGGC TGCCGTAGTC
TTTTTTCCGG CTCTGGTTCG ATTAGCCTCG CGCCGAACTC TGGCCGGCGC TTTGGGTCTG
TCAGCTGGTG TCATGGTCTA CGTCTCATTC GTCGAGATAT TTGGCAAGGC CTCTTCAGCT
TTTGAAGATT CGGGTATCGA AGAGGATACT GCCTACATCT ATGCCACTCT GTGCTTCTTC
GGTGGTGTTG TTCTCATGGT GGTACGTATT GATATGACCT TTCAATCGAT TTCTATTTAC
CAGTATGGCA GAAGCTAGAA CCTTACTAAA CGTTCGATAC TTGTTGCCTC TTCTCTGCAG
ATACTCAATT CCATGGTGTC CTGTCTCCTT GGAGGACATC ACCACCACAG CCCCGACCAG
TCATCCAATA AAGGTCCTAC TGGTACTCAA GAAATCAGCA ACGTCGACCA AGAAGTTCTG
CCACGGCGCA TGAGCAACGA AGATCACGCC AACCTCCCGT GCTGCTCGGA CGACCCGGCC
GCCGACCTTG AAACCCTTCA CAATATGGCG GCCGAAATTG AAACCACCGA GAATCAGAAC
AAGACGTGGG AAGGTACTTT CGTCGCCGAA GAGAGCGATT CTCCAGGATC TCCGGACGAG
GAGGACACGC CGGAAACCAA GGATTCCAAG AAGCTCATGC GCATGAGTTT GAACACTGCG
CTGGCAATTG GAATTCACAA TTTCCCCGAA GGCTTGGCGA CTTTTGTCGC CACGCTTGGA
GATCCCAAAG TGGGAGGTGT ACTGGCCGTC GCTATTGCCA TACACAATAT TCCCGAAGGT
CTCTGTGTCG CCATGCCCGT CTACTACGCC ACGGGCAACC GCTGGAAGGC CTTTGGCTGG
GCTATGCTGT CGGGCATGTC CGAACCTTTT GCAGCGCTTT TGGGATGGGC CATCTTGGCC
AATTCCTTTT CGGATAAGCT ATACGGGATA CTGTTCGGCA TAGTTTCGGG TATGATGGTA
GTTATTTCCA CTCGCGAACT ATTGCCGACG GCGCATCGCT ACGATCCCGA AGATTCCGTT
GTTACTTACT CCTTCATTGC TGGTATGTGC ATAATGGCGC TCTCTCTTGT TCTCTTCTTA
CTGT
|
|---|
| Protein sequence | MAFGLVIGAG AATGLGAAVV FFPALVRLAS RRTLAGALGL SAGVMVYVSF VEIFGKASSA
FEDSGIEEDT AYIYATLCFF GGVVLMVVRT FVAEESDSPG SPDEEDTPET KDSKKLMRMS
LNTALAIGIH NFPEGLATFV ATLGDPKVGG VLAVAIAIHN IPEGLCVAMP VYYATGNRWK
AFGWAMLSGM SEPFAALLGW AILANSFSDK LYGILFGIVS GMMVVISTRE LLPTAHRYDP
EDSVVTYSFI AGMCIMALSL VLFLL
|
|---|
| |