Gene PHATRDRAFT_48287 details

Gene Information

• Locus tag: PHATRDRAFT_48287
• ID: 7203382
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: +
• Start bp: 736445
• End bp: 739039
• Gene Length: 2595 bp
• Protein Length: 839 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002182592
• Protein GI: 219124609

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.323261
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGCATCGAAG CAAGCAAGCG CACCGTTGCA ATTCTTTTCG ATTTGACAGA CTGACCAAGC 
CTATCATTCT CTACCATGCC GGCATTTTCG AGCAAGTTCG GTTCGGCAGC GCGTCCTTTG 
CCCGTGCGCC GACGAACTAT GGGCTCCGGT AGTCGACGCA AATGGACTTC TGCGTCACCA 
ACCTGCTGGA TCGGCATGAC AATGTTTTGC TTGGTGGTTA CCTATGTGGC TGTTGTTGTT 
GTTGTGACAC GCAATCACAT CGTAGGAGAA GATAAATCCT ACCATGAAGA CAGTCCTTTG 
GCTGCACACG CGCCGGAAGC CCCATTGAAG TCGTCCCGGA AAAACCGACT CGACTCTGTC 
CAAGACACGG GGAGGAAAGA GCAGCAAATC GAAACGCGAG CAGAAAAGAC CAAAAGGAAT 
CCCTTTCGGC GACAACACCT AGAAAATCCC TTCGGACACG GCGTAGCACC GGACGTCTTG 
CTTCCAAAAG ACGAAGGAGA CGGGACTGAC GCCGAACCAA ACCATCTCGC CGCAAAGATA 
GACCCGCCTC CGGAGACACA TCCTTCACCA GACTTTATTT TGAAAGCATT TCTAGAGCCC 
TCGAGTCTGG ACGAGTGGAC TCGCAAGCCG TTGCCTATCC GATCGCAAGC AAAGCAACAT 
AATTTGCGAG AAATATCGTA TCCGCGATTG AATTCTTGTT CGAAATTGAT ACAACAATGG 
CCGGTTGATG ACACTCCCGC AGACATTGAT CCCTTTCTAC CTTGGATCCA CGACGTTTTT 
CCGACTCATG ATGGAGCATA TGTACAGTTT GTGGCACAAA ACAAACGTCG CTGCAAGACG 
GGTCACAAGG AAAAAGATAT TATGGCTCAC ATGCAGCCAC AAGTTGCACT CTTTCAGCAC 
GTTCCCATCA AGCGCCTCTC CAAGGATGAT GGTACCGCTT CCGAAACACG ATACCGTTTG 
TCGAGCCACG AAGAGGCCGA CCCCGATGGC GTCGTCACAC GTTTCATTTG TCGATTCAAA 
CCAAGTATGG AAGAAACACT CTCCGAATTC AATTTCGACT ACGATTGGAC GGCTCTGAGG 
AAACGGTACA AGAACACCTT TTCCGAAGAC GACGGCGGCA TCAAATCAAT TCACACATCA 
CAACTCCTTT TTCGCTGTCC TATTCCAAAG GCATTACAAA ACGACATTCG TCTGGGTCGA 
TCGGTCGATC CGAAAACCGA CTGGACCAAG TACTTTGTGG ATCTGATTCC TATACGTACA 
CCTCCTCGGT ATGGACCGCC CAAGCAGTTC TTGCAGCCCC AGTACAAAGA CTTTTTGGAC 
AATAATGTTA CGGCACGATT CGATCCAGAA CACGAGTGGG GATCACAGCA CATTCTGCCC 
GCCATCAAGG ATTCTGGGCG CTGGGAAAAC ATTCCAATTT GCCAACCGTC TCTTATGACA 
TACGAAAACC AAAAGGCCGA CGAAGACTTA TCTGCCTTGA TCCTATCCAC AACACACGCT 
ATTGAGCCTG TCAAAAAGCA CCGTTTAGTT TCCTGTATTT GGGCTTCTGC GGGATATACA 
ACGCGTGGAA ACCGATTTGC CATAAATGAT GGGCAGCGAC GATTGTTGGA ATGGATTTCC 
TACAACAAAG TGATCGGATT CGACCACTTT TATCTGTATG ACAACTCGGG GGCTTTCAGC 
AATGATACTT CACTGAAAAG TGTGGCAGAT CTTTTTCCAG ACGACGTCAC CTACATCCCT 
TGGCCGTCAC AAATATGTAA CAATAATCCC AACAACGTTG ACAGCGTCGG CGAACGCTCT 
TCCCAGTACG CAGCGGAGTC TTCTTGCCGG CTGCGGTTTG GTCCCCACGT CGACTGGATT 
GGCCAGTTTG ATATCGATGA ATATCTGATT CCCATGGGAA AGCATTCCGA CGTCTTATCT 
TTGTTGAAAG AGTTGGAAGC CGAAGATACG CGCATTGTTT CTTTCGGCTC TTGGCGCGCG 
TGGCCTCGAC GCGCGTTTAT TGACGAGATT GTGGAAATAA ATGACCCAGA GATATGCTGG 
CACAACGAAC CTTGCTTTCA CTTACAGATT CCTCTGAAAC ATACTATGCT TCAAGCCTAT 
AATTGCGATC GACAACCGCC CGGTCAAAAG AAAGAAGTGA TGCCCGCTGA GAAGCAGTTG 
TACCGTCCTG ACTATGTCCT GCAGCATTTT ATACACTACT CAGCCGTCAC GACTTTGTCA 
GAAAAAAATG AGAGCGAATA TGTAAAAGAG GGGATGGTAT GGAAGCCTCG TGGTTTTCCC 
GATCCTCGGC AGCGCTTCGG GGACGAACTA TCCGAAGCAC TTATGATCCA TACCAAGGCA 
GTTGCAATTC AAGATACATC CGGTTGGCAA CGCATGTGTC ATGTCGACAA CTTGAAGCTT 
CCGAGAAGAA AGCAAGGACT TTGTCGTCTT GGACTACCTT GGCCGAAAGA TCCTGCAATG 
GCGGCACAGA ATGGAACGAA AGAAGGCTGG GCCTTTAATT GCTACGTGAA CGAAAAGGTC 
GAAGCACAGC TGATACCGAA GCTCGAGGAA TCCATGAGAC AGAGAGCTCC GCACTTCTTT 
GATCTAAGAC AATAA 

 

Protein sequence

MPAFSSKFGS AARPLPVRRR TMGSGSRRKW TSASPTCWIG MTMFCLVVTY VAVVVVVTRN 
HIVGEDKSYH EDSPLAAHAP EAPLKSSRKN RLDSVQDTGR KEQQIETRAE KTKRNPFRRQ 
HLENPFGHGV APDVLLPKDE GDGTDAEPNH LAAKIDPPPE THPSPDFILK AFLEPSSLDE 
WTRKPLPIRS QAKQHNLREI SYPRLNSCSK LIQQWPVDDT PADIDPFLPW IHDVFPTHDG 
AYVQFVAQNK RRCKTGHKEK DIMAHMQPQV ALFQHVPIKR LSKDDGTASE TRYRLSSHEE 
ADPDGVVTRF ICRFKPSMEE TLSEFNFDYD WTALRKRYKN TFSEDDGGIK SIHTSQLLFR 
CPIPKALQND IRLGRSVDPK TDWTKYFVDL IPIRTPPRYG PPKQFLQPQY KDFLDNNVTA 
RFDPEHEWGS QHILPAIKDS GRWENIPICQ PSLMTYENQK ADEDLSALIL STTHAIEPVK 
KHRLVSCIWA SAGYTTRGNR FAINDGQRRL LEWISYNKVI GFDHFYLYDN SGAFSNDTSL 
KSVADLFPDD VTYIPWPSQI CNNNPNNVDS VGERSSQYAA ESSCRLRFGP HVDWIGQFDI 
DEYLIPMGKH SDVLSLLKEL EAEDTRIVSF GSWRAWPRRA FIDEIVEIND PEICWHNEPC 
FHLQIPLKHT MLQAYNCDRQ PPGQKKEVMP AEKQLYRPDY VLQHFIHYSA VTTLSEKNES 
EYVKEGMVWK PRGFPDPRQR FGDELSEALM IHTKAVAIQD TSGWQRMCHV DNLKLPRRKQ 
GLCRLGLPWP KDPAMAAQNG TKEGWAFNCY VNEKVEAQLI PKLEESMRQR APHFFDLRQ