Gene PHATRDRAFT_48229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48229 
Symbol 
ID7203347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp580114 
End bp581208 
Gene Length1095 bp 
Protein Length349 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182563 
Protein GI219124548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.691204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGTCCTTC CCTAAAACGA ACCATCGTTG TATCCGTCGA CCAGGATGAA CTTGTTCCAG 
CCCCGGAATA AGGAAAATTC CCCAGACGAT GATCAAGTTA CATTAATTGG AAGTTTTGCG
GATATCATTG CCCAGGGCGT GTCGTGGAAG GATTTCTTCC GAGCGTGTGT CCCGCCGAGG
ATCGTGTGGA CGTCGGTAGA CTGCTGCTGC CTCACGGACC AATCCCAAGC CCCCATCGAC
CACAATTATG CGGTTGATCT CGTTGTCCAA GTCCCGTCGA TTGACAGCAA GCAGGTTCTC
CATATATCGG CCCAGAATGC GCAAGCCGCC GTGGGTACCC TTGCCGGTTT GTTGTTGCTC
TTGGCGAACG GCAAGGACGA ACTCGAACTC ACGTTCCAAA GTTTCGCGAC GCAACCGAGA
CATCCCTTTC CCCCTTTGGC CAGCGACACG GGGCTCGCAA CGGTATTGTC CGCCAAGCAC
AAGATTGTCG CTGTGCGGTT GCAGTTTGTG GACGTGGATG ATTCGACCTG CCAGCTGCTG
GCCAAAACGA TACCGCGGAT GGAGTATCGA CAGTGCACCG TAGAGGGACT GCATCAGGCC
GTCGCGTCCA ACCAATGTCC CTCCAAACTT ACCATAAGCT GCACTCTGCA AGAGTTCGCC
AAGTTTGGTA CGGGACTGGG TGGAAATTCG GTCGTCCGAA GCATGGACTT GTTGCTGCAC
TTTTGGCTAC AGGGAGAGCC ATTGCACGAT TTCTGTAGAG GTCTAGAACA CAATCTTGGC
TTGGAAACAC TCGTCATCCG CTATCTCGAT ATTAATGATG ATGGCTGGAC TATGCTGTTT
CACGCACTAC GGTTCCACCC TACCCTGCAG ACGCTCTGTT TGCAATTTAC CGACGACTTT
GTGGACAACT TTCGTAGGTT GACACCGGAG CGTCGGACGC AACGGACGCA AGTAGTTCTG
GACTTTTTGG AGGAAAACCG CGTTATTCAA AATGTTACGT GGCCTATCTT CCAGCAAGAT
CAAGAGCTTA TGGACGACAT TAAGAGTCGA CTCGAACGCA ATCGTGGAAC TGGGGAAGAG
CGGGAGCACT CGTAA
 
Protein sequence
MNLFQPRNKE NSPDDDQVTL IGSFADIIAQ GVSWKDFFRA CVPPRIVWTS VDCCCLTDQS 
QAPIDHNYAV DLVVQVPSID SKQVLHISAQ NAQAAVGTLA GLLLLLANGK DELELTFQSF
ATQPRHPFPP LASDTGLATV LSAKHKIVAV RLQFVDVDDS TCQLLAKTIP RMEYRQCTVE
GLHQAVASNQ CPSKLTISCT LQEFAKFGTG LGGNSVVRSM DLLLHFWLQG EPLHDFCRGL
EHNLGLETLV IRYLDINDDG WTMLFHALRF HPTLQTLCLQ FTDDFVDNFR RLTPERRTQR
TQVVLDFLEE NRVIQNVTWP IFQQDQELMD DIKSRLERNR GTGEEREHS