Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48229 |
Symbol | |
ID | 7203347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | + |
Start bp | 580114 |
End bp | 581208 |
Gene Length | 1095 bp |
Protein Length | 349 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182563 |
Protein GI | 219124548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.691204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTGTCCTTC CCTAAAACGA ACCATCGTTG TATCCGTCGA CCAGGATGAA CTTGTTCCAG CCCCGGAATA AGGAAAATTC CCCAGACGAT GATCAAGTTA CATTAATTGG AAGTTTTGCG GATATCATTG CCCAGGGCGT GTCGTGGAAG GATTTCTTCC GAGCGTGTGT CCCGCCGAGG ATCGTGTGGA CGTCGGTAGA CTGCTGCTGC CTCACGGACC AATCCCAAGC CCCCATCGAC CACAATTATG CGGTTGATCT CGTTGTCCAA GTCCCGTCGA TTGACAGCAA GCAGGTTCTC CATATATCGG CCCAGAATGC GCAAGCCGCC GTGGGTACCC TTGCCGGTTT GTTGTTGCTC TTGGCGAACG GCAAGGACGA ACTCGAACTC ACGTTCCAAA GTTTCGCGAC GCAACCGAGA CATCCCTTTC CCCCTTTGGC CAGCGACACG GGGCTCGCAA CGGTATTGTC CGCCAAGCAC AAGATTGTCG CTGTGCGGTT GCAGTTTGTG GACGTGGATG ATTCGACCTG CCAGCTGCTG GCCAAAACGA TACCGCGGAT GGAGTATCGA CAGTGCACCG TAGAGGGACT GCATCAGGCC GTCGCGTCCA ACCAATGTCC CTCCAAACTT ACCATAAGCT GCACTCTGCA AGAGTTCGCC AAGTTTGGTA CGGGACTGGG TGGAAATTCG GTCGTCCGAA GCATGGACTT GTTGCTGCAC TTTTGGCTAC AGGGAGAGCC ATTGCACGAT TTCTGTAGAG GTCTAGAACA CAATCTTGGC TTGGAAACAC TCGTCATCCG CTATCTCGAT ATTAATGATG ATGGCTGGAC TATGCTGTTT CACGCACTAC GGTTCCACCC TACCCTGCAG ACGCTCTGTT TGCAATTTAC CGACGACTTT GTGGACAACT TTCGTAGGTT GACACCGGAG CGTCGGACGC AACGGACGCA AGTAGTTCTG GACTTTTTGG AGGAAAACCG CGTTATTCAA AATGTTACGT GGCCTATCTT CCAGCAAGAT CAAGAGCTTA TGGACGACAT TAAGAGTCGA CTCGAACGCA ATCGTGGAAC TGGGGAAGAG CGGGAGCACT CGTAA
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Protein sequence | MNLFQPRNKE NSPDDDQVTL IGSFADIIAQ GVSWKDFFRA CVPPRIVWTS VDCCCLTDQS QAPIDHNYAV DLVVQVPSID SKQVLHISAQ NAQAAVGTLA GLLLLLANGK DELELTFQSF ATQPRHPFPP LASDTGLATV LSAKHKIVAV RLQFVDVDDS TCQLLAKTIP RMEYRQCTVE GLHQAVASNQ CPSKLTISCT LQEFAKFGTG LGGNSVVRSM DLLLHFWLQG EPLHDFCRGL EHNLGLETLV IRYLDINDDG WTMLFHALRF HPTLQTLCLQ FTDDFVDNFR RLTPERRTQR TQVVLDFLEE NRVIQNVTWP IFQQDQELMD DIKSRLERNR GTGEEREHS
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