| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48215 |
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| Symbol | |
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| ID | 7203527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | - |
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| Start bp | 535697 |
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| End bp | 538400 |
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| Gene Length | 2704 bp |
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| Protein Length | 879 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182705 |
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| Protein GI | 219124845 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACACCATGG CACGTAGGAC TCCCGAGGTT GTTCCGACCA AGTCGGAATG CCGCTGCCGC
CGTCATGACT AGTCGACGCG TGACGTTGTG CCGTCGCAGA CTCGCGAACC CAATGTGCGG
TGCGGCGACT GCGTACGTCG TGAATGGAGC CGGCACCCGA GTACGGCTCC GCAATCTCCG
TGACACTGCG GAATCGACGC ACGCAATCCT ACCGAGAACA CCACTACACT TTCCCACACG
TGCCTTGTCC ACCTTTTTCT TCCACCCAAA CATGGTGTCT CTGTATTCAC GATCGTTCTC
ATCAGTATCG TCGTCGTCGT TATCATCGTT GGCAACTTCA TCTCCTTCCG CGTCGCCCGG
ACATTCACCA AAGCGAGAGC CAGAGGTGGA GCAGAGATCT CAGCGACCCC AGCAACCAAC
AACTCTCTGC CAGCGACTGC AAACTTGGAG AGGAAAATTC TCCCTCGATA TAAGTCACGA
CCAGAAACCT TTAAACTCGC TCTTGGACGA GATCAATCAA TGGTCCAAAG GATTGTCGAA
AGCCAACACG CAACGCGACA CCTCGCTGCG TTTGGTCGTC CACGAATTGG ATGTTTTGGT
TCGTGCACTC GTGCAACACA AGGATCCCCA TGCCCCCGTG ACGCAACACG CCTTACACAC
GGCACTGTCT TTGTACGCGA AACAACAAGC ACACACGCCC GCATCACCGG AGCCCTCCCA
ACGAGCGCTC GCACTTTTTC AATGCCTACA AATCCCCTGG TCGTCCATTG GCCCGCGGGA
ACGCAACGTC CTTATTCGAC AACGTCGACA GCAGTATCAA GCGGTGTTGC TCGCTATTCG
ACACTGCCGA GAAGCATCGC AAGCTCCCGA TCCCGAGCAT GTGTGGAACA AACTAACGGA
AGAAGCGACA CGCTTTCGTT TATACAATTT GATCACCACG AACGGCTTCA ATATGGTCGT
GGCCGGGATG CACCGCAATC CCAACCGGGC GCGACACTTT TGGGATACGC AGTTGGGGCG
GTACGGACTC ACCGCCAACG CGGGTACCTA CGACGCACTC GTGTCCGTCT ACCAAAATCA
GCGCCACCAA GGGAACTGGC AAGCCGCCCG CCAAGTGTGG CTGGACAATT GGCGGGCCTA
CATCGCTACG CCCCAACCGG AGTTACGACC CATGCCCGTC ACACTTTCGC GTGTACTCGG
GCTCGCGCGG GACAAACCCT GGCAGGCCCG TAATATGCTC CACGAAGCCT TGCACTTACA
ATCGCAATTA CCTTTTGGCC GCAGAAATAT TCCTATGGTA GATAGCGGCT GCGTTCTGCA
TGTACTGAAT GCTCTGGTCC AAGCTCGTCT TGTTGTCGAG GCGGAACAAC TCTTGGAAGA
CGTGCAACAT CGGTACTATA ACGAGGGCGC AACGGAGCTC CAGCTCAATC CTAAACATTT
CGTGGTTTTG CTGTCGGGGT ATACCCAAGA CTTGACCATT CAAGGATTGA CACGAGCAGA
AGCCTTTTTA AAAACTATTG AGAAGCAATT TCTCTTGCAT CCAAGCCAAC GGATGGACGC
ACCTTCTGTC TCGGAACCAT TCGACCAGAC TGCCTACAAC ATTATGGCAA CAGCATACTT
GAACGCCAAC CGACAAGATG CCGTTTCTCA AACTGAACGA CTCATGGAAC GCATGAGCAA
TCACGCGGGC ACTTTCCAAA ACTGCCACTT GTATCCGGAT CGTATCACAT ACTCAATTCT
GATGCGAGCG CTTGTGCAAG AGCGAAAATT AGGCTTCCAT CACAAGGTAG AGTGTTTATT
GCTTACGATG CTGGACGATC TGAATACGTC AAGGCAGCCT GACGTTGCAA CTTTTATGGT
TGCGCTGGAA GCTTGGTACC GGAGTGACGA TCCTAATGCG ATTCAAGGGG CAGAAAGATT
GTTTCGTAGG ATAATTTTCC CTGTTACCCG CTGCTACAAC TTTCTTTTAA AATTTTACGT
GAGGGATGGG TTAGGGGACA AGGCGGAAGC CATTCTCAAG GAAATGAAGG ACGGGAAGAA
GCCGGAGTGT GTTCCCGACA AGTATACTTA CTGGGCGGTC CTGCAAACCT GGCGTAACTC
CTCACATCCG GAACGCTTTG ACCGTGCGAA GCGAATTTTC AAGTTATTGC TCTCCCTTTC
GGAAAGCACA TGGAACGACG TTGCGTTGAC GATATTGCTT TCGACACTGG CGTCGACAGA
GGTCCCTGCC AACAAGAATC GCGAAGCGCA GGAACTATTG GATCTTAATG AACAGACGCT
TCGTCACTCA TGTGGTTCAT GTGGTGAGCC TCTTTCTTGG AGTGTTCCAG TGGTGATTGC
CTTCATTAGA GCTTGTGGCG AGACAAAAGG TAGTGAAGAC GATTTCCGCG AAGCCCTGCG
CAATATATAC GACAAAGAAA AGCTGCTTGG TGGTAAGGCT ACACCCGAAG TGTACGCGGC
GGTTTTAGAC GCGTGCTCGA AACTGAGTGT CGATCCCGTA CAGCTTGGCC AGGAAGTCTG
CTTCATCTTT GAGCAGTGTA TAAAGCATGG ACTCGTTAGC TATCCTCTAT TGAATGCGCT
CCGACGAGTG GCAAAGCCGG ATATATACCT GTACCTCACT TTACAGGACA GCAAGAATGC
GCCAGACATG GAGAATATCC CAGATGAGTG GAAAAAGAAT GTTGTCGCTA CAGTCACACC
CTAA
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| Protein sequence | MTSRRVTLCR RRLANPMCGA ATAYVVNGAG TRVRLRNLRD TAESTHAILP RTPLHFPTRA
LSTFFFHPNM VSLYSRSFSS VSSSSLSSLA TSSPSASPGH SPKREPEVEQ RSQRPQQPTT
LCQRLQTWRG KFSLDISHDQ KPLNSLLDEI NQWSKGLSKA NTQRDTSLRL VVHELDVLVR
ALVQHKDPHA PVTQHALHTA LSLYAKQQAH TPASPEPSQR ALALFQCLQI PWSSIGPRER
NVLIRQRRQQ YQAVLLAIRH CREASQAPDP EHVWNKLTEE ATRFRLYNLI TTNGFNMVVA
GMHRNPNRAR HFWDTQLGRY GLTANAGTYD ALVSVYQNQR HQGNWQAARQ VWLDNWRAYI
ATPQPELRPM PVTLSRVLGL ARDKPWQARN MLHEALHLQS QLPFGRRNIP MVDSGCVLHV
LNALVQARLV VEAEQLLEDV QHRYYNEGAT ELQLNPKHFV VLLSGYTQDL TIQGLTRAEA
FLKTIEKQFL LHPSQRMDAP SVSEPFDQTA YNIMATAYLN ANRQDAVSQT ERLMERMSNH
AGTFQNCHLY PDRITYSILM RALVQERKLG FHHKVECLLL TMLDDLNTSR QPDVATFMVA
LEAWYRSDDP NAIQGAERLF RRIIFPVTRC YNFLLKFYVR DGLGDKAEAI LKEMKDGKKP
ECVPDKYTYW AVLQTWRNSS HPERFDRAKR IFKLLLSLSE STWNDVALTI LLSTLASTEV
PANKNREAQE LLDLNEQTLR HSCGSCGEPL SWSVPVVIAF IRACGETKGS EDDFREALRN
IYDKEKLLGG KATPEVYAAV LDACSKLSVD PVQLGQEVCF IFEQCIKHGL VSYPLLNALR
RVAKPDIYLY LTLQDSKNAP DMENIPDEWK KNVVATVTP
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