| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48210 |
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| Symbol | CYCP1 |
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| ID | 7203333 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | - |
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| Start bp | 522442 |
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| End bp | 525442 |
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| Gene Length | 3001 bp |
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| Protein Length | 935 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182703 |
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| Protein GI | 219124841 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTCG ACATTGCCAA CACCTGGCTC GCCATGGGCT TTCGTCGCTC CCGACTGAAT
CGGCACTCGC AATCGGCGGC CAAGCTCTTA CGGGATGCGG AAAGTGTCGA CCAGACACAC
ACTGCGCATC GGCGGGATCC TAACGGCCGC AATGCTGGCA TGGTTCTGGG TAGGAACCAC
ACGGCCAGGG ACGATGAGGC CGGATCCGGC ATCGAGGGCT CGATGTCCTA CCACGATGTC
GTATTCCGTG TCACTGCTAT CCCGTACGAC TCGAGCATCT CGCGTGTCGA CTTGGGACTC
CGACCTTCCC GTGTACGGCG CCAGCGGACG CCGCGTCGCC CGTCCCCCGT TCGTATCAGA
CTGAATCGTA CCCCGGCGCG GGAACGAAAA CGGGAATGGG CACCTACAAC GACCGAGGTC
ATCGGAAGCC GCCGGCGGGT CCTACCAGCG AAACAGCGTA GGACATCGAT TAGGTCGCCG
ACCCGTCGAA CGAAAGCTTG TTTCCGATCC AGAGAAACCG GAGTTGTATT GCGACAGCAG
CATCCGCGAG ACTCACCAGT TCCTCCAGAT TACACCGGAT TCCCGGTCAA TAGTATGAAT
TCGGCATGGC GGACGGCTAC GGATCCCAAC ACCGGACGGA CGTACTATTA TCACGTGGAA
ACGAGGGAAA CGCAATGGCG GAAACCCATG GAATTGGCTA GTGAAACGGA ACGCCAGGAG
ATGGAAGAAA AAGAAAGGCG ACAGCGTGAT TTCTTTGCGG CAATGGAAGC CAACATTCTA
CGGAATCTGT CTCAAGAACA GCCTAACAGC AGCAGCGTTT TGTCGATTGT CGCTGAGAAC
GAACGAGGGG AAACCAAACA TCCCGAAGGC TTGGCGGCTC CAATCCAACC TTCCAAACTG
TCCCGAGGTG CGTTTGCCCA ACGGACTTCT TCCTTGCTAC GACCCAATCT TGTACGAACC
ATTTCTACCA TGGACGAAGC CGTCATCACG GACCTCGTCA AACGCGTTCC TTCCCATCGT
AGTATTCTAC ACAGTGATCC CGACGAAATC TCTTTTCTAC CCCACGACGT CATGGCAAAA
AATGAGTCCT TTCGACTGGC ACGGAATTCC TCGCAAATGC TATCGATCGA CGAAGTTATG
CAAGAGTCGC AATCGCACGG ATTTAATTTA GAACAATTGA ATTTGCAAGA TTCCGGAGTG
GTGAAGCGGC GGCAATCCGA CGTGAGCTTG GGACCCGCCA ATGCGGTAAC CCTTGCCAAA
GAACCTTCCT TTGGTACCAT ACTTGGGACG CTACCGGACG ATCACGATCC CAATTCGAGG
CAGAGCAGTT TTTACGGAAG CTCGGCACTG GACGAATCTA GTTTCAACTT TGGGTTGTCA
ACCGAAGAGA CCCTAGCTCT ACAAAAGCTT GCCGAGGTTT CCAATAGCAT GTCGCGTCTC
AGTTTCGGAG CCTCGCGCGA CTTTTTGGGA GAAATTGGGG AGGAGGAAGA CGAAGACGAT
TCCGAATCGA GCGAAATAGT CATGACCCGA GGCTCCGCAA TGGTGTTGCC GGAACGACGA
CTTTCGTCGG AGGCCTGCCT TGCTCCCCGA AATCGTAACA ACCTCTCCAG TTTTCACACG
GCACGTAGCC ATTTTGACGC CAGTCAATCC TCCATGCCCT CTCTAGCCGA AATGAACCCG
CTGGCGTCTG GTCCGTACTC GTCGTCAACA CGCTTTCAAG ATAGCTTAAC GGCCTCACGC
AACGAGAGGG AACGAGCACT TTTGGAAGGA GACGGTTCGG GACAGCAGTC ACCAACGGAA
TGGAACGAAT CTACGGCGAC GAATTTAGAG TGGGATCCCA CCGTTGAAGA AAAAGAAGCG
GAAGCGTCGC CCAACGCAGT CCGACCGAAA ATTACCCGTG CCATTAGTAA TAAAAAACCT
GCCGAGCTTT TAGCATCGCG TCCGGGAATT GGTTCGCGAC GAAACACGTG CGGAACGCTC
TACGTTGGGA GTACCATGTC GGATCCCGAC AAGGACGCCT CCATCAAGGT ACGTGGATTC
CTGGCGACTT GATCACTTTT GTGTTGGTGA ATCTGGACCA TGTGCTGACC GATCGAGTAC
TGTTGTGTGA TGTGTCGATA GTGCGTGTGT GGCGTACTTC GGGCTCATAT TTTGCAATCG
GAACTGGAAG AGAATGCCGC GGCTGCTGCT GCGACTGACG AGTATCGAAT CTTTAACGAC
CTCGAATCGC AGCAGAGATC ACTCAAGAAA AAGTTTCGAC CGAATGTTGA CTTTGTCGTG
AAGCCGCCTC CGCCATCCCT CGAGGACATA AGCACGTTCT ACCGGGATGT CTTTACCCGG
GCCCAAATGG AAACGGATTG TATTATTATG AGTCTAATTT ACGTGGAACG GTTGGTCAAA
GTCACGGATG GAAAGCTTCG GCCACACCAG AGCAACTGGC GCTCCATTCT GTTTAGCTGC
ATGGTGCTCT CCAGCAAAGT CTGGGACGAT ATGTCAATGG TACGTCGAGT CTTGCACGTT
TGGTTGCTGT CTAGGTATGA ATGCTTTGGA ACGATTAGGT GGAGCTCACG TGGATTCAAT
GCTTTGTTGT CATTGGCAGT GGAACGCCGA CTTTAGTCAG ACCTGCCCAG CGGGCATCGA
ATTCACTTTA CAGCGGATCA ACGCTTTGGA GGTGGCCGTG CTGTCTGCGC TGTCGTACGA
AGTGAAGGTA CCGGCTTCGG AATACGCCAA GTACTACTTT TTGCTACGAT CCATGATAAT
CAAGAGCGGT TTGGGGGGCC AAGATTTGAT GAAAAATCCG CTCGACATTG AGGGCGCCCG
GCGCTTACAG GCCGTCTCGG AGCGCTACCA AGTCGGTGTT TCCAAACCGG GGGGCCTCGC
CAACTTTCGA TCGAAGAGTG TGGGTGCCAC CGTCGCGTTG GAAGGCAGCT CGAACAAGGT
CACCGCAATC GAACAGCCCT CACAGAAGAA GATTGGCTTG GAGCACGTAA TGCGCATGTA
A
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| Protein sequence | MTVDIANTWL AMGFRRSRLN RHSQSAAKLL RDAESVDQTH TAHRRDPNGR NAGMVLGRNH
TARDDEAGSG IEGSMSYHDV VFRVTAIPYD SSISRVDLGL RPSRVRRQRT PRRPSPVRIR
LNRTPARERK REWAPTTTEV IGSRRRVLPA KQRRTSIRSP TRRTKACFRS RETGVVLRQQ
HPRDSPVPPD YTGFPVNSMN SAWRTATDPN TGRTYYYHVE TRETQWRKPM ELASETERQE
MEEKERRQRD FFAAMEANIL RNLSQEQPNS SSVLSIVAEN ERGETKHPEG LAAPIQPSKL
SRGAFAQRTS SLLRPNLVRT ISTMDEAVIT DLVKRVPSHR SILHSDPDEI SFLPHDVMAK
NESFRLARNS SQMLSIDEVM QESQSHGFNL EQLNLQDSGV VKRRQSDVSL GPANAVTLAK
EPSFGTILGT LPDDHDPNSR QSSFYGSSAL DESSFNFGLS TEETLALQKL AEVSNSMSRL
SFGASRDFLG EIGEEEDEDD SESSEIVMTR GSAMVLPERR LSSEACLAPR NRNNLSSFHT
ARSHFDASQS SMPSLAEMNP LASGPYSSST RFQDSLTASR NERERALLEG DGSGQQSPTE
WNESTATNLE WDPTVEEKEA EASPNAVRPK ITRAISNKKP AELLASRPGI GSRRNTCGTL
YVGSTMSDPD KDASIKCVCG VLRAHILQSE LEENAAAAAA TDEYRIFNDL ESQQRSLKKK
FRPNVDFVVK PPPPSLEDIS TFYRDVFTRA QMETDCIIMS LIYVERLVKV TDGKLRPHQS
NWRSILFSCM VLSSKVWDDM SMWNADFSQT CPAGIEFTLQ RINALEVAVL SALSYEVKVP
ASEYAKYYFL LRSMIIKSGL GGQDLMKNPL DIEGARRLQA VSERYQVGVS KPGGLANFRS
KSVGATVALE GSSNKVTAIE QPSQKKIGLE HVMRM
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