| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48179 |
|---|
| Symbol | |
|---|
| ID | 7203507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011684 |
|---|
| Strand | - |
|---|
| Start bp | 428930 |
|---|
| End bp | 430151 |
|---|
| Gene Length | 1222 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182683 |
|---|
| Protein GI | 219124799 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATTTTTCAA AATCCATTGA CGAAACGCCA CAACTATTCC ACTTCTTTCC TTACCGACAG
GAATCACAGT CAGTACTGTA CAAGTCGCCA TGAGTGCCAA CGTCGTCGAA GACGCGGAAG
TAGCCCTGCC GGTCGCGGAC CTGGGCGACG AAGCGGCCTT CGCCGTGGAC GAGGACGGGG
CCAACGCAAC GCCACCGAAC AAGTGGAGCA AGAATGGTTT CGGGGCGGAG GTCGAGAAGC
AATCGGGCAA GTTTTCCAAA GACGAAAGCG AGCTAGTGCG CAAGTCGGTG GAAGAATTCT
GTGCCGCTAA GCAGATCTCG ACGGCACGAC TATGTTCGGA ATGCGATCAC AAGGTAGGTT
CCCTGCGGGG TTGTGGGTGC GAAGGTGAAG GTATCTAGCA CCCCTGGCGC TCGCAGTTTC
TCACCAACTT ACCTCGCTTA CCCTTACTTG TTTGTAGGCG GAACTCAAGG GCGCTTGGAT
GGAAATTGCC AAGCAGCTTC CGCACCGTAG CGTACAGTCG GTCTATCGTC ATGGCATTCG
TCAGCTGCAC CCCTTTAAGA GAGGCGCTTG GAGTGATACG GAATGCACTC AGCTGGTAGA
ACTTGTACAG CGTTTGGGGA AGAAATGGAG CTCGATTCAG TCCAAGCTGA ATCGCTCGGC
CGACTCTTGT CGCGACAAGT ACCGAGAAAT GTCGGACGAA TACGTGCGGG GTCGTTGGAA
GGAATCCGAG ACAGAGATTC TGAAGCGTTT GATTCGTGAG CACTTGAACG TCGAACCTAC
GACGGACATG AAGACGCTGG GCAAAATGGT AGAAGATCAG AATATCCAGA TTCCTTGGAG
TACAATCAGC AAACGCATGG TCAAGCGTAG TCGCCTCAGC TGCTTCAAAA AGTGGCAAAA
GATGACGGGG CTCTACTCTC CCGCGGACGA TTACAAACGT ACCACCCCCA CCAAGGCAGA
TACAGGCGAC GAGCCGGTGT TCAAGCGAGC AAAGGTGGAA CATTTGGAGC TGGATGACGT
CCCCAAGGCG GGGATAGCGA CGTCCGCCTT TCTGCAGGCT CCCACTGCGG GGGCAGCGGC
AGCCCTCGCG GCGGGAAACG TCGTCAACGC GTCCGGCGAG TACGATGAAA TCTACGATTC
TGCCAAAATG GCTGACGAGA CGGTCCAAGC TGTTGACTTA CCGGATACGG ATGTGTTGGT
ACCCGGAGCT GTCCGAGACT AG
|
|---|
| Protein sequence | MSANVVEDAE VALPVADLGD EAAFAVDEDG ANATPPNKWS KNGFGAEVEK QSGKFSKDES
ELVRKSVEEF CAAKQISTAR LCSECDHKAE LKGAWMEIAK QLPHRSVQSV YRHGIRQLHP
FKRGAWSDTE CTQLVELVQR LGKKWSSIQS KLNRSADSCR DKYREMSDEY VRGRWKESET
EILKRLIREH LNVEPTTDMK TLGKMVEDQN IQIPWSTISK RMVKRSRLSC FKKWQKMTGL
YSPADDYKRT TPTKADTGDE PVFKRAKVEH LELDDVPKAG IATSAFLQAP TAGAAAALAA
GNVVNASGEY DEIYDSAKMA DETVQAVDLP DTDVLVPGAV RD
|
|---|
| |