Gene PHATRDRAFT_48175 details

Gene Information

• Locus tag: PHATRDRAFT_48175
• ID: 7203312
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: +
• Start bp: 416176
• End bp: 418244
• Gene Length: 2069 bp
• Protein Length: 604 aa
• GC content: 58%
• Product: predicted protein
• Protein accession: XP_002182531
• Protein GI: 219124481

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.696617
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGAGA CGGAGAGAGA TGCACGAGTC AGTCGCGTTA TCGAGAGGGT ACGGCTACGA 
GAGGAAGTCT GTGCGAGACC AGTAGCGTAC GGTACGGTAC GGTACCGGAT CGATCGATCA 
CTCCACACCT GGGTTTGCGA TCGGTACCAA GCGACTGTAC TACCTATTCG GTCTCCCCGG 
CACCGTACGG ACCGCGACGG CGTCGGCACA TACAGACACG TAGACACTTT GACGTACACA 
GGTACAGACA TAGCCAGATA AATACAGACA CCCGTACACA TATACACACA TATACACACA 
GACAAACTCG GAGGGGAGGG GGGCCGGTTC CGCCACGCAG TGCACACGTG CACAACGCGC 
GTTGGGGTTT CTCCCGAGGC GTGCCGTTGC CCTTGCCCTC TCTGGGCGGG AAAAAGTCAC 
GGTGTCATCC TCACGGGTAC ACGACCTATG AATGTCAGAA CACCACCTTG TTGAGACATT 
ACCTCTCTCG TTGCCCTTTC TTGTTTCTCA TGGTGGTGTC GACCTCCTTG CTCCTCCGTT 
ACAATTTAAA CGCCCCAACG ACAACGACAA AGAGTCTTCT ATAGTAGTCT TTCTCAAGGT 
CCACCAACAC CAAGCACATT TTCAACACTG TATCGTTCGG TTCCTTCACT CGTCTTTCTG 
ATTTCCATCA TCCCCTCGGA TCCTACGGGG CCGTGCGGCT CTACGGGTTG ACGTCCATTC 
CGGCCAATCC AATCCAAACT GTTACACGCA CACTTTCTAT CCCCCCAGGC TTCCCTGATC 
ATGAGATCGT CCCAGCCCCT TTCACCCACC GGCTCTGGTT TCGCCTTGTA TCGCTCGCGC 
ACACGTCGCC ATCGTCTACC CGGACCGTAC CCTTGGGTGT CGAGAGAAAC TCGTCCAGGC 
GACCGCGACG GGGGAGCGTG GCACTCCGGC GACCAAGGTC GCTATCCTTT ACCACCATGT 
CGGCCTACAC GCGCACCGAT ACCCACGCAT CCGCCGGTTC CGTCGGCCCC TCCTCTCCAC 
ACTGTCAAAC CTGCACTTGT CACTTTCACG AACTCGACGA GGCGCCACAC CTTGTACCAT 
CACAACAATT ACCACAATCC GTAGTACCAT TGCCGCCTCC TTTACCGGAA CCAACCTATT 
CCGTACGTCG CCGTGTTCTA CCCGCTTCCC TCGTGCCGCT CAACAGCCGA CAAGGCACGC 
TCTGGCTCAC GGACTGTCTT ACACAAAACA CGGCCGCCTT GTATATTCCG CTTTCGGAGC 
ATTTTTGCAA TCAGTCGGAT CCCGCCTATT GCGGCGTCAC CACACTCCTC ATGGTCCTCA 
ACGTCTTTGC CATGGATCCA CACGTACGCT GGAAACACGG TTGGCGATAC TTTGGGAACG 
AAGACGTCCT CTTGTCCCAG TGTTGTTTGA CTCCGGAACG GATTCGACGG GCCGGTATTT 
CCATGCACGA ATTCGCGCAA CTCGCCTCCT GCCAAGGCGT GCGGGTCCGT ATGCAACGAC 
CGCAACCCCC ATCCGCGATA GAGACCGACT CGGGGTCCGT CCACACCAAC CCATCATTCG 
ACTTGGATGA CCTGCAACGC TTCCGATTGG ATATTCAACG GGTCTTGTCA GGCACCGCCG 
AGACCTCCGG CAATCCGGCC GCCGCGATGG AAACGAATGG CGTTATCGTA GTCAGTTTCA 
GCCGCGCCGT CCTGGGACAA ACGGGGGACG GCCATTTTTC TCCACTGGCT GCCTACCACG 
CCGCCACGGA CCAGGTTCTC GTCCTCGACG TGGCGCGCTT CAAGTACCCG CCGTACTGGG 
TGACCGTGAC GGACCTCTAC CGGTCCCTCT TGCCGCACGA TCCCGCCACG TCCCAATCGC 
GGGGATGGTA CGTTTTGCAA CCCCCGCTCC GGTCCGCCTC GTACCGCGGA AGCGCCGGTG 
GAGAAGACCG ACGTCCGGCC AAACTCGTAC CGCTCGTGGG TGAACCGCAC GGTGCTCGCA 
CACACGCCTG TCCCGTGCAG GTCATTAAAA CGGCGTATTG CCAAGTGGCG GAACACGAGC 
CGCGGAACAA TGATGCGAAA GGCCCGTAA 

 

Protein sequence

MHETERDARV SRVIERVRLR EEVCARPVAY GTVRYRIDRS LHTWVCDRYQ ATVLPIRSPR 
HRTDRDGVGT YRHTNSEGRG AGSATQCTRA QRALGFLPRR AVALALSGRE KSFSRSTNTK 
HIFNTVSFGS FTRLSDFHHP LGSYGAVRLY GLTSIPANPI QTVTRTLSIP PGFPDHEIVP 
APFTHRLWFR LVSLAHTSPS STRTVPLGVE RNSSRRPRRG SVALRRPRSL SFTTMSAYTR 
TDTHASAGSV GPSSPHCQTC TCHFHELDEA PHLVPSQQLP QSVVPLPPPL PEPTYSVRRR 
VLPASLVPLN SRQGTLWLTD CLTQNTAALY IPLSEHFCNQ SDPAYCGVTT LLMVLNVFAM 
DPHVRWKHGW RYFGNEDVLL SQCCLTPERI RRAGISMHEF AQLASCQGVR VRMQRPQPPS 
AIETDSGSVH TNPSFDLDDL QRFRLDIQRV LSGTAETSGN PAAAMETNGV IVVSFSRAVL 
GQTGDGHFSP LAAYHAATDQ VLVLDVARFK YPPYWVTVTD LYRSLLPHDP ATSQSRGWYV 
LQPPLRSASY RGSAGGEDRR PAKLVPLVGE PHGARTHACP VQVIKTAYCQ VAEHEPRNND 
AKGP