Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48145 |
Symbol | |
ID | 7203295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 337184 |
End bp | 338637 |
Gene Length | 1454 bp |
Protein Length | 462 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182665 |
Protein GI | 219124762 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.196185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTTATTGCG TTTCCATCCT CCAAAGACTT GTCCAGTGAC CCATGCCGGA AACAAACACC GTGTCATGAA CTCACTGGCG AGAGCTTGTT GCCTGATTCT CACTCTGGTA GGGACGACGT ACGCCTTTTC AAACGCGTAC CCGTCCTTTG CCACTCGATC GTTGCTGTAC GGACAATCCT ATAGCCGGGC GTCGACACCT TGGTATCGTC GGTATGCCAG TTTGCAGGAG CCGGTCTTGG AAGATCTCAG TACCAGCAAA AACGGACTGA TACGAGTCTC GCAGAACGAA ACACTGGCGG TTATTGTTCC CCGTGACGAG GCTTCAGTGG TGGCATCCGA CATATTAGGC TCTACGGAAT CCGGGACACC CGAGACTACA GTATGGCGCG ACCGAACCAC CCAATCAATT CTGCTGCTGA ACATGGTGGC CATTCTATGG GGCAGTCAGC ATGCAGTAAT CAAGGGCGTG ATCGCAGATA GTGCTCCGTC CGCGTTTACG TTTCTGCGTT TCGGTCTCGC CGCCCTGTGT GCTAGTCCGT ACACACCCGG GCTTGCACAA CTCTGGGCAA AGCTCACCAA AGGCGAGGAT TTGGATGCAA TTGTCAGTGA AGAGTCCAAC CCGACTAATG TGAGCTCAAC GTGGCGATGG GGCGCCGAAA TGGGTTTTTG GATGTTTCTC GGCTTTTCCT TTCAAGCAAT TGGTCTAGAA TTTACCACTG CCCAGCGATC CGGCTTTCTG TTGTACCTGA ACGTCAAGTT TGTCCCGTTT TTGGCCCGTA TACTCCTCGG CCGGGCGATA TCGAACGCTA CCTGGCTTTC CGCGTTGACA GCCTTTGCCG GAACCGCCCT GTTGGCCTAC GGCAGTAACG GCAACGTCCT GGACTTGAAC GTCGGAGACT TGTGGACGAT TGCGGCTGCC GTCTCGTCCG CCATGTTTAT TTTGCGATTG GAAAAGGCGT CGTCCGTCGT GGCCAACTCG GCCGCCTTGA ACGCGGCTTG CTTGTGGGTG GTGACGGGAC TGGCCGGGAT TTGGACGTTT TGGGAGGGCA ATCCCTTTCA AGCCACCGCC GCCGCCTCGG TATGCTTCAA TCCAGCCGCC GAAGTTATGT CGATCGCGTT AACCCATCCC TGGGAGATTG TGTATCTGAG CGCTGTAACG ACGGCCTTGG TGAACTGGGT ACAGACCAAG GCACAAAAGG ATGTATCGGC GGAACGAGCG TCGGTAATAT ACGCCATGGA TCCAGTGTAC GGCGCTGGAT TTTCGGCCTG GCTGTTGGGC GAGTCGCTTG GTGGTGTTGC AGGATGGACC GGCGCCGGGT TGATCACGCT GGCGGCGGCC ACCAACGCCT TTTTGGATTT TTCGAGCAAA GACCCCAAGG ATGGCGACGA TACCGACGTC GACACGAGCG CCAGCAATTG TGATACGACC AGTGCAGGAA TGGGAAAACG ATAG
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Protein sequence | MNSLARACCL ILTLVGTTYA FSNAYPSFAT RSLLYGQSYS RASTPWYRRY ASLQEPVLED LSTSKNGLIR VSQNETLAVI VPRDEASVVA SDILGSTESG TPETTVWRDR TTQSILLLNM VAILWGSQHA VIKGVIADSA PSAFTFLRFG LAALCASPYT PGLAQLWAKL TKGEDLDAIV SEESNPTNVS STWRWGAEMG FWMFLGFSFQ AIGLEFTTAQ RSGFLLYLNV KFVPFLARIL LGRAISNATW LSALTAFAGT ALLAYGSNGN VLDLNVGDLW TIAAAVSSAM FILRLEKASS VVANSAALNA ACLWVVTGLA GIWTFWEGNP FQATAAASVC FNPAAEVMSI ALTHPWEIVY LSAVTTALVN WVQTKAQKDV SAERASVIYA MDPVYGAGFS AWLLGESLGG VAGWTGAGLI TLAAATNAFL DFSSKDPKDG DDTDVDTSAS NCDTTSAGMG KR
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