Gene PHATRDRAFT_48137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48137 
Symbol 
ID7203289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp304687 
End bp305885 
Gene Length1199 bp 
Protein Length379 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182509 
Protein GI219124435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAACAGAAG AAGCAACAAC AAAAACAGCG GAAAGCCCCA CGAGAGTCTG CGTTTCGACA 
TGTCGTATAC GCAAGCCCCT CCTCCGCACG GCGATGACCT CCTTCGCTCA ACAAGTACCC
TCGCGCTCAA CAACGTCGGA GTCGCACTCC TAGAGCGATC CTGCTTCCGT CAAGCTATGG
GCACTTTCCG GGACGCCCTG GCGAACCTCC AAGACATTAA CAGAAGTTTT GCTAAGTTGC
GCCTCCAACA CGCGACGCAC CGCTTGGCCT CTCCCCAAAT CGATCTGCCC CGCGAAAGTG
CCAACCCACA TTCCGACAAA CTTCATGCAT TCCGTATCGA AACGCTTTCG GACACGGATT
CCGTACCAAG CCTGTTGGCC CGCATGACGC AAACATTGGT ACCGACGACT GCGCCGCTAG
AGCCTTCGCC TTCGTCGTGC GATATCCAGA AAGCATATTC GACCAACTTA GTTCCCCGCA
CCTTGATCCT ATGCCCAATC CGCATGGAAC AGATAAATGT AGGAGAAGGT ACTAAGCTTG
CCGTCCTGCT CTACAACTTT GCGGTGGCGC ATCTGTGCTT GGCAGAGACG ATCACGACGA
CCATAGTCAG TGATGACGAC GATGAGGAGG AAGGCGACGA AGATACCAAC TACCACGAAC
AGCAAGATAT GGACTGTCTC ACTTCAGAAC AAGATTTTCT GTACGATAAC GCCTTGCAGA
TCTTAAATCA CATCAAGGAC ATGCTATATT CGTGGATTGC CAACGAAAGG CGCGCCGATT
TTAACATGCC ACACGCGTCG GGGGCAACAT CCGTGCAACA TGTCACGTCG GGAGCCGGCG
AAAGCCGATG GTACGGAAAT TGTCTCCCGT ACCTCTACGC GGCTCCACCG GAAGTTGCCT
ACTTGCTCGC CGTTGGCTGC GACCCTGGTC GCTTGTTGCG GCAGTTGTTG CAAATATTGG
TATGGGACTA CACTGGTCAC GTGTTCGCGG CCAACGAATT GCACGGTGAC GCCGATGCCG
CGTTTGAACA GACCTGGTAT TTGAGGGAAA CGGCGGCTCA GTTGCAAATG TCTTTTTATC
AAAACAGCAG CCTCGCGATG ACGATGACTC GAAGGGGATG GCGTTTCCCT AATCGCGAAA
TCAACACTTT TCAGGATCCA ATCAGCGTCA TCGCAACCGG GACCGCTGAT GCAGCATAG
 
Protein sequence
MSYTQAPPPH GDDLLRSTST LALNNVGVAL LERSCFRQAM GTFRDALANL QDINRSFAKL 
RLQHATHRLA SPQIDLPRES ANPHSDKLHA FRIETLSDTD SVPSLLARMT QTLVPTTAPL
EPSPSSCDIQ KAYSTNLVPR TLILCPIRME QINVGEGTKL AVLLYNFAVA HLCLAETITT
TIVSDDDDEE EGDEDTNYHE QQDMDCLTSE QDFLYDNALQ ILNHIKDMLY SWIANERRAD
FNMPHASGAT SVQHVTSGAG ESRWYGNCLP YLYAAPPEVA YLLAVGCDPG RLLRQLLQIL
VWDYTGHVFA ANELHGDADA AFEQTWYLRE TAAQLQMSFY QNSSLAMTMT RRGWRFPNRE
INTFQDPISV IATGTADAA