Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48135 |
Symbol | |
ID | 7203483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 296297 |
End bp | 298819 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182656 |
Protein GI | 219124743 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.525832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGT CCCGGACAAA TCAATGCGTC GAGCTTCCCT CGTCCGAGCG GTCGCCCGAA ACGAACGGAA CACATTTGAC CATGAGTGCG ACCCAGCGGT ACCCGACTGC GAACAAACGC CGGCGTATGT CGAACACTAT GAAAGACGAT GCACGCACTC AAAGCAAAGA CGGTGTCTTG AGTGGGAATG ACTCATCGGT GGCCAGTAAT TTTTCTGGAA ATCACAAAAA TACGGGGACG GACCACTACG ACGATGTTGA CGTTCTACAG AACCAAGGCG TTGGGGAGAT GTCTAAAAGC ATGGATTGGA AACACGAAAT TGATCCATGT AACGGGAAAG CAAGCGATTT CACATCATCG TCGGTGGTGA TCAATCCATC CGGCACAGGA GGAAAGCAAC CGAACGCGTT GTTCGCTGAC AGACAAAGCT TTACCTCATC GAAGAATGAT TTTGCTGCGA AGAACGGAAA ACACTCTCCT TCTTTATCGA TAACAACGCA AATTCCGAAT GACATCGATA CGTGTGTGTT GAGTGTCTCG GAAATTCGCC ACGATGCACC AAAAGACTGG TATCACAATG AGGCAATGTA CACGGAAAAA GTCTGTCCCG GTTCTGAGCT CCGACATGGA AATCTCAACT CGCCCGATGA AGCAAACATT GGTAACGAAT CACAAATGCT CCATTCGCCG GCCCCTCGTC CCTATCAAGA AAGGCTCAGG ACTCCGGGAA GCGGCGGAAT GGGCGCTAGC CCTCAAAGAA TATCACACAA GTACAATAAA CGATCGTATC CTTCCCAAAA TCATTTCGGT GACGATGACC TTCATAGTCC TTGCGAAAAT CCCGGAAGCC GTATTGGGCC CAATTTTCAA GTCACAGAAC TACCAATACC GTCAAACAAT TTTAAAAAAT CGGAGCAAGG CGTTGTAATT TGGAGTCCAC AGCTTGCCCG ATTGGCGACA CTGTCCGGGC AGGACCTTGA CGGCTTTTTG GAAAAGGCGA AGGAGTCGAA TGTTTCATTC CAGCTCATGG AGGCTCTACA CCGTAGTGGC TACAATACCA AGGCTGCACT TACAGAGTTT ATCGGTATGT ACCACGAAAA TCCGGATATG TCGATTGAGA TCACGAACGG TGATCAACGT AGAGAACTTG AATCTATCTT TGAACGACTA GCAGCGAATG CCCATGGAGA TGGGAATGGT ATGGATTCTA CTGCCCGCGC CTTGAAGACG CGAAGGGAGA AGGTTATAGT TCATTACTAC CGATGGAAGT GCAAGAGCAG CGTTTACCAA AAACGGAAGT CTCTGCTACG CCGCCAGCCT CTGGAGTATG ATACGTGCTT TGTCTGCCAA GATGGGGGGC TTTTACTTAT TTGCGATCGA TGCAACAAAA CCTACCATCC TCGTTGTGTA AACCTCCGTG TTGTACCTGA AAAGGAATGG CTTTGTGAAA ACTGTAAATC TGAGCATATT CCCAGAAAAA AGGGACGACC GACTCCTACC TCCGGAAAAG AAATGTTGCC TACTTTGCTC TCTGTCCACA AAGAACTCGG GACCGCACAT AATACCAAAG GCATAGTAAC CTCTTCTCAG ACATCCTTCC CGTTGAACGG AGTTGCAGAT GTAAGCCATC TGTGTCCTCC TCCGGCAACT ATACACATTG ATTCGAGAAG TGAATCAACA GCTTGCTTCG TGAGCGCGTT TGAAGGGTGT GTGGGTTGCG AAAGCGAAAG GTCTGTGGAA CTCGAAGACG ATCAGGGGAC TGTAGAATCG CCGTCCAACT CGGGCTCCTC GATAAGTGAA AAATCTCCGT CGAGCGCGTC ATGCCCAGAC GTCTACGGCT CCAACCAATC GGTCACCATT AACTCCCCTG GCGCAACTTT GTTACGAGAG CTGTTGTCTG ATCGAAGCAC TTTGTCATCG ACTAGTTCGG ACACGTCTTT CATGAAATCA GATACCGATT TTGACGACGC GCTTGAAGAG CTGTCTTCCG AATGTGATTC AATCCCGATG ACGCTACGGA GCCCATCACA ACCAGACGGA GGCCTTCCCG GATTCCGAGC TCCAGCAAAT GGAACAAATC AGGACTCTAC CGCGGATAAG TCAAATTCGG AGGCATTGAC TAGCCTTCAA TTTGCATCAA CTTGCGGACA AGGTATCTCG AGTACCTCTT CACAAAACGG GGCTCCATAT GATACCTTCG GCTACATTCC TCCTTTTAGA CCTCCAAATT ATTGGACGCC AGCTTACGTC CAACAAGGAT TGAGTTCAAA AGTACAATAC CAACCAGCTG CTACTTTTGC GATCAATCCT TCGCCGCTAC CTCCGTCTTA TTGTTCGAAC ATCGCACAAA CGAGCCACAC TACTGATTCA TTGCGAGCTT TCCCACCTCA CCTTAATCCT TTTCAACCTG GGTATGCATA TTTCAACCAA TATCAAACGG CAAAGCCGTC AGTACCTATA CCCAACGCAA TGAAGTACAT GCAATATCTC TCCGCACACA ATAGCTCCGA TCCACAGCCG TAG
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Protein sequence | MEKSRTNQCV ELPSSERSPE TNGTHLTMSA TQRYPTANKR RRMSNTMKDD ARTQSKDGVL SGNDSSVASN FSGNHKNTGT DHYDDVDVLQ NQGVGEMSKS MDWKHEIDPC NGKASDFTSS SVVINPSGTG GKQPNALFAD RQSFTSSKND FAAKNGKHSP SLSITTQIPN DIDTCVLSVS EIRHDAPKDW YHNEAMYTEK VCPGSELRHG NLNSPDEANI GNESQMLHSP APRPYQERLR TPGSGGMGAS PQRISHKYNK RSYPSQNHFG DDDLHSPCEN PGSRIGPNFQ VTELPIPSNN FKKSEQGVVI WSPQLARLAT LSGQDLDGFL EKAKESNVSF QLMEALHRSG YNTKAALTEF IGMYHENPDM SIEITNGDQR RELESIFERL AANAHGDGNG MDSTARALKT RREKVIVHYY RWKCKSSVYQ KRKSLLRRQP LEYDTCFVCQ DGGLLLICDR CNKTYHPRCV NLRVVPEKEW LCENCKSEHI PRKKGRPTPT SGKEMLPTLL SVHKELGTAH NTKGIVTSSQ TSFPLNGVAD VSHLCPPPAT IHIDSRSEST ACFVSAFEGC VGCESERSVE LEDDQGTVES PSNSGSSISE KSPSSASCPD VYGSNQSVTI NSPGATLLRE LLSDRSTLSS TSSDTSFMKS DTDFDDALEE LSSECDSIPM TLRSPSQPDG GLPGFRAPAN GTNQDSTADK SNSEALTSLQ FASTCGQGIS STSSQNGAPY DTFGYIPPFR PPNYWTPAYV QQGLSSKVQY QPAATFAINP SPLPPSYCSN IAQTSHTTDS LRAFPPHLNP FQPGYAYFNQ YQTAKPSVPI PNAMKYMQYL SAHNSSDPQP
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