Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48121 |
Symbol | |
ID | 7203437 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 257432 |
End bp | 263216 |
Gene Length | 5785 bp |
Protein Length | 1874 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182648 |
Protein GI | 219124726 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGACT CTAGTCCAGT TGAAAAGAAT CCAAATGACA AGGATGACGA AAGCTTTTAT AAAGAGGGGG ATGTCGTGCT TGCTGTAAGC CGAGAACCAC GGCAGCATGC TTCACGGGAG GAGCTTGATG CTCCCGCACC TTGTGCATCT CCCGGAACCA AACGGACATT TACTATTCTG GCTCATCCAG GCATGCCCGC GGCAACCATG ATAACCGGAA GAGCGCCAGT GGAGAAAGCA AGTGTTCTCT CAGGACTTAG TTTTAAAATG CCCGACCTTG CGACCGTGCC GGTATCCGGC TTGGCCATCC AGGGCACGAC TGCAAGCCCT GCAACCTTCG AACCAACGAA GCCACCGGAA GGCAAGCCAG AAATCGTGCC GACCGCTACT ACAGTTAGCC ATGGAATTTT CGACGATGCG GATGACGAAG AGGATGCCTC AATGCCGCTT TCGACCCTCA AGCCTAACAA ATCGAATTCG TTTTTGGAAT TGCAAACGCA GAATTTTCCT ATGAAGAACA CTGCACCTAT GGACGTCGAC GAGAAGGTGC GGGAGGCTCC ACGCTCCGAT CTAATGAGCA TTGTTTTGGG AAAAAGCCCA GCAAGGAAAC GGGTAGCTGA TTCTTCTCCT GGTCCGATAT CACTTCCGAT ACCCGAATTA CCACCGAAGT CGTTTGAGGC TGATGTAGTC GAGCAACCGA CAAAGCGCCG CCGAAAGAGT GCCACCCAGA AGAAGCTGTT GGTAGCCAAA AAGGAGCGAG ACGCAGCCCA AAAACTGCTT TGCGACAAGT TCGATCTTCG CGATTTTCTA CCTGAGGAGG TCTGCAAATT TTTAGGGTGT AACTTTTGGA TATTTACGGT CGATCAGCTT CGGTGTGTGC TAAAATCGAG TCATGACGAC GAATATCTTG CCCGGCAAGC CAAGGAGATT CGAAAAGAGA TCGTGGAATT ACTCAAGAAA AAAGACGGCA TTTCGTCTAC CGGCAAAGGA CAGAACGCAA CGGGACCGAT GGATCATGGA GAGAATAGTA CAAAAACAGC AAGTACTCTT CCGACTACTC AGATTACGAA CAGACAGCAA AATCACGATG GAGGCAACGG AACCATGGAA AAGGATAAAG CCGAACAAAA CAAATTTGAA AATGCCGGAT CAGTCCAAGC TCCCGATGAA ACAGTCTCGC TCGCTGGTCC AAATGTTGAA GCCGAATCGA CTTTGCGAGG ATGGCTAACA ATGTTGCCGG CTGGCAATGA GAGCAGTGCG ACCCAAGTGG CGAAACGATT TCCTTTAGAT GGGGCGATTT CATGCCTCAT TCCTCTGAAT ATTCGCAATT TTTTTGCATC GGCTGGAATA AAAACTCTTT TTGAGTTTCT TTCAATAAAA AAGACAGAGA CCGGATCAAT TTGCGATATT GAGCAAATGT GGAGAGACCA GTGCAATCTG AAGAAAATGC CCGCGGTAGC GCTCGCCAAG CATCTACTCG GAATTGGGTC TCGTCTTGAG GCCGCAATCT CTACTGTCCC TGCGGTTGGA AAAACTGACC AAAAATGGAT GAATGACCCA ATAATTGTGT TAACGGGTGC TGCCCATGAG TTTCTTGTTG ACCGTATGGG AATTAAGAGT GGTACCAATT TCCTGAATAT GCGAACCAAG GACTTGTCCG TACAACTGGT TTTTTGGCGC AATAGCAAGG GTTTACCTCC ATTAAAAGGT TCAGGGAAGG TCGCAATGAT TTCGGGGTGG AAAGCATCCG TCAAAGAATC CATTGAAGTT GAGCAGCTTC CCGGAAAGGT GTTACCCTTT ATTGATCTAA CGGATCTGCC CCCTGCTGAT CTTCCAGAAG CAAGCTCAGA GCTAAGATCG GAGGAACCGC GTGGATATTC CGGGGCAAAA CACAACGTCT CAAAATCGTC TGTTGTTGTA ATGAAAGAAA AGCTACCTGT TCTGAACAAG CAAGGAAAGT ATGCATTGCA CTCGCCGCTA CTTTTAGAAG AAGTCCTTGG GAAAACTCTA ACTTCATTTC TGAAATCTGC TGGGATTGAC ACGGCGGCAA AGTTGTTCGG AGCAAAGCGA ACTCCAGAGT CATTGCTTGG TCGTGCGATT CGAAAATCAC AAATTGCGGT TGACGCAGAC AAAGCTGTGA CTGAATGGTT GGATAAAATA CGTGCGGAGC TGAAGCAATT TGAGCCGTTG CCCTCTCCGC GCCAAGTACG TGCCAAAAGG GCAGTAGAAA AAACAGCAAA ATCTGTGACA GACCCGTTCG ATGCATTAAG CGCACTTACC AAACGATTTC TCACGTCGAT GGACATATCA AATGCCGAGC AGTTTCTCTC TGCAAGGACA ACCCATATCG CGAATGAATT TGTCCAGTTC AGAACAAAAG AGGGGATGCC TGACCTGAAG GGATTGGGCG CGATTGCTTC AGTGAGCGGT TGGAAGGCTC AATGCAGAAA AGTTGCTCGA GAAATGGGTC TTGATGCGAT AGGGAATATA GAGCCTGACG CAAAATCCCA AGTCACTCCA ACGCTGGCGG CACCCAATGT TGCGTCCTCA AAGCCGAACG ACTACATCGA TGCTTCTATG AAACGCTTGC CGGAAACAAA GAATCTTCCT TTTCATCCTG ATGTCATTTT CGGTGCTCCT AGGCAACCAT TTTCAGTTCA GGCAACCCAA GGTGAGACTG GTTCTTATAT ATTGAGCTTG AAAACATTGT GAAGCCCAGG CTGAAACCTC ACAACCAATT TTGTTGTTTT AGCAATGGGA AATGTGCGTT TTCTCTTCCA TTTGTCGGTT CGGACTGAAG CGAGTAGCTC TCAGTTAGGT CTCTTTCTAT GCTATGATGG TGCATCCAGT GGAGAAGTTG ACGTCACAGA GAACTGCGCT GCTATTGTGG ACAATATCGC TGGGTCTCAG TCCTCTGCGA TCGTACTGCC CGTACTCCGT GATGGCTCTT CGAAAGTCGC ATCAACTACA GAAATAGTGG ATCATCGTTT CACGTTTAGA ACTGCAAAGG AAGGTTGTGG CTTGATCCGG CTGAGAAAAC ACGGCGTTCG GCCATTTCAA GACCAGGATC TCAGCTTGTT AAAGGAAGAG ATAAGATCTT TCCTATTTTC GGGCAACACT GACCGACCAT GCGAAGCCCC AAAATATGAT CCATACAATA TTCTGCTAGA ACGTGACAGC TTGGGCAAGT ACGATTACCT ATTCTGTACA GACATCTTTT TTGAAAAAGG ACAGATGTCG CGAGTACAAT TCATATCTGT GTCAGATTTT ATCCGTTCGC GTCGCCACGA AGAGTCCTCG CAACCGTCTC GTCCACTCAT TGACGCCGCG CTATATCTGA TATCAAATAA AGATCTTGAA AATGCAATCA TTTTTGTCGA AGAAGTATTA GCTGAGACGA CTGATTTCAA CGAGGCCGTT GACATGATGT TGGCGTCGGA ATCGAATACG GAGAGATTGA CACATTTTGT CGCGGCTGCG AGGCTGAGGC AGAGAGCGGA CTGGGTGTTT CGACGGATCG TGGATGCAAT GAGTTCTAAC TACCGCGAAC GCAAAATGGC GACAACTCGG TACAAACTAT ACTTTGGTCG CCGCGCGCTT TTGAATCACA GCAAGATCAA GAATTTGAAG CCCGAGATCT TGGAACAGTT AAGGACGACG ATTGCAACCG AAATGCGTAA TGACTTTTTC TCGGGCATTG GTCTAGAGGG CGTTTATCGC CAACTTCGAC TTTCCTATTG GTGCCCGTTG GCACAATCCG CATTGGATTG CCTGCTTGAT ACGATCATAG GACATTTCGC CATGACAGAT GGAGCCAACA TTTTGTTCAA TGTTGAAGAA AAGCTTCAAT TATCCTTTGC GAAACTTTTA CAGGAAGATC CGTGTGTAAT CCACTGTCTC ATCAATCAAC ATGGTTCCAG CAAACAGGAG CTTGATGGAA GGATAGTGTG TGTTGACCAA GAAAGCGAGG AAGCAAGGAA TACGACGCTG CGTACACAAG TTGACGTTGA AAACGGTACT TCCAAAATAT GTACACATTG GTACCTAAAC CTACTATGGC AAGTGGCGAT TGTCGTTATC TCCACCTTTG GCAACTTGTA TGAAGACATT GAGTTTCGTA AAGACCGTAT TATGAAAGCT CTAAAGGGAG TGTTGGAACA ACGGACTGAT ATAAATGAAT CTTTCGGTCC TACTCTCGAC ATGTTGAAAT TTGATGTTTT AGTGCCTCTC CCCCTCAGTG ATTGGAAGTG CTTTACGCCT ATTCCACTCT CTCGCCAATT CTTTCTTGGT CTGGTCTGGC CGTTACTTCG CAAATTAGGG TGGCGTTTGG ATGTTGGCCA AACCCCAGAT CACGTATCAT TTCTCGCCCC GTTTCGAAAT GGTCACAATG CAAAGAAATT GAAACATGCG AAGCACCGTA TGATCCAGAA GCGAGCTCGT CTTGAAAAAG AAACCAACCA CAACGTTGGT CTAGGAATTT TGTCAAAGTC GACGAAAAGG ATCTGCATAT CAACTTCAAT TCGGGAAGAG TTCGCTGAAA TAGGCTCCCT TCGAAAAGTA TCGACAAGCA AGGCTTTGGA TTTATTTGTC GAACACGTGC AAGACAGGTC CAATGAAGGG AACATCTTCT ACAACAAACA AATAGAAGAC GTCGTCAATA GTATTCGCGT TAGTTTTGAC GAGCTCGCTC CTTCTCTGGA CTCTGTCAGA AAAACTTTGG ATGGTCTGAA GCCTTCTGAG TCGTTGGGGA GTGAGTACCT GTTCCAGTTT CTATTCATCT TGCCCAGCAT CCTTCGCCAA TCTAAGATTC CCATGCATCA ATTAGATGAT GCTATCGAAA TTGTGAAAGA GCTCATTGCA TTTTTAACAA ACATCTATGA CGTTGTTCTC GACGAAGAAT TTCAACCGCC CAAAGAAGTA TACGCACAAG ACGAGGACAG CTCTGTATCC ACGTTAGCTG CACGGCTGTC AAGCAAGACA GAAGAGGGAG CGGAACGGAA AGGCCCCATA AAGTCGTTGA CTGAGACTGT TTTGGAAGAG GACAAACCAG ATCTTACCGA CTTTATGGTC GTTGTTCTAC AGCAAACTAT TCCAATCCGT GCGACAGAAG AAGACATGGC AAGGAAAAAT CGTCGTGTTC AAGTTGGTTT TCCAGGTCTC GGTTGTCGGC ACTGCACCGG AAGCGGGGCA GGACGATATT TTTTTAGTTC AATTGATAGC GTAGCCACTG CCGGCACCGT AATTGAGAAG CACGTGATGA AGTGTGGTGC TATCGACGCT GGGATCAAAG CCATTGTGGC TGAAGCCAAA ACTAGACATA CGGCCCAGCG GAAAAACCAT CCACAAGGAC TGCAGCAAAA GTTTTTCAAC CGGTTATGGG ACCGTTTGCG TAATTCCAAG ATTGGAGGTG AAAGCAGTGG GGTGTATTTC TTTGAGAAAA AAGATAGTGC GGACGACGCC GAGCATGGTG AGATCCTTTC GTTTAGCGAT CACGTTGCAG TGCTTGATTA TTTACACCAA TCCCCACGGT GGAGAGAACA TGGTGGTGAC TTGCTCTCTG CGATCCACCA GTACTACAAC AGTCTCCAAT ACGGTAGCAG GGTATACGGC ACGTCAGCTA TGCCCCCAAA TTTCAGTTCT GAATGGTTGC TGAGCAAGAT TTTGCCAAGG AAAAGAGTTT TCAACAAGGC TGCTATGCCC GGCTAACAGA CCAAGGCATG TCACAAGCAG AATAGAAGAA CCAAAGAAAT AAAAAATGAG AACGATAATG AACTCTTACA TTAAC
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Protein sequence | MEDSSPVEKN PNDKDDESFY KEGDVVLAVS REPRQHASRE ELDAPAPCAS PGTKRTFTIL AHPGMPAATM ITGRAPVEKA SVLSGLSFKM PDLATVPVSG LAIQGTTASP ATFEPTKPPE GKPEIVPTAT TVSHGIFDDA DDEEDASMPL STLKPNKSNS FLELQTQNFP MKNTAPMDVD EKVREAPRSD LMSIVLGKSP ARKRVADSSP GPISLPIPEL PPKSFEADVV EQPTKRRRKS ATQKKLLVAK KERDAAQKLL CDKFDLRDFL PEEVCKFLGC NFWIFTVDQL RCVLKSSHDD EYLARQAKEI RKEIVELLKK KDGISSTGKG QNATGPMDHG ENSTKTASTL PTTQITNRQQ NHDGGNGTME KDKAEQNKFE NAGSVQAPDE TVSLAGPNVE AESTLRGWLT MLPAGNESSA TQVAKRFPLD GAISCLIPLN IRNFFASAGI KTLFEFLSIK KTETGSICDI EQMWRDQCNL KKMPAVALAK HLLGIGSRLE AAISTVPAVG KTDQKWMNDP IIVLTGAAHE FLVDRMGIKS GTNFLNMRTK DLSVQLVFWR NSKGLPPLKG SGKVAMISGW KASVKESIEV EQLPGKVLPF IDLTDLPPAD LPEASSELRS EEPRGYSGAK HNVSKSSVVV MKEKLPVLNK QGKYALHSPL LLEEVLGKTL TSFLKSAGID TAAKLFGAKR TPESLLGRAI RKSQIAVDAD KAVTEWLDKI RAELKQFEPL PSPRQVRAKR AVEKTAKSVT DPFDALSALT KRFLTSMDIS NAEQFLSART THIANEFVQF RTKEGMPDLK GLGAIASVSG WKAQCRKVAR EMGLDAIGNI EPDAKSQVTP TLAAPNVASS KPNDYIDASM KRLPETKNLP FHPDVIFGAP RQPFSVQATQ AMGNVRFLFH LSVRTEASSS QLGLFLCYDG ASSGEVDVTE NCAAIVDNIA GSQSSAIVLP VLRDGSSKVA STTEIVDHRF TFRTAKEGCG LIRLRKHGVR PFQDQDLSLL KEEIRSFLFS GNTDRPCEAP KYDPYNILLE RDSLGKYDYL FCTDIFFEKG QMSRVQFISV SDFIRSRRHE ESSQPSRPLI DAALYLISNK DLENAIIFVE EVLAETTDFN EAVDMMLASE SNTERLTHFV AAARLRQRAD WVFRRIVDAM SSNYRERKMA TTRYKLYFGR RALLNHSKIK NLKPEILEQL RTTIATEMRN DFFSGIGLEG VYRQLRLSYW CPLAQSALDC LLDTIIGHFA MTDGANILFN VEEKLQLSFA KLLQEDPCVI HCLINQHGSS KQELDGRIVC VDQESEEARN TTLRTQVDVE NGTSKICTHW YLNLLWQVAI VVISTFGNLY EDIEFRKDRI MKALKGVLEQ RTDINESFGP TLDMLKFDVL VPLPLSDWKC FTPIPLSRQF FLGLVWPLLR KLGWRLDVGQ TPDHVSFLAP FRNGHNAKKL KHAKHRMIQK RARLEKETNH NVGLGILSKS TKRICISTSI REEFAEIGSL RKVSTSKALD LFVEHVQDRS NEGNIFYNKQ IEDVVNSIRV SFDELAPSLD SVRKTLDGLK PSESLGSEYL FQFLFILPSI LRQSKIPMHQ LDDAIEIVKE LIAFLTNIYD VVLDEEFQPP KEVYAQDEDS SVSTLAARLS SKTEEGAERK GPIKSLTETV LEEDKPDLTD FMVVVLQQTI PIRATEEDMA RKNRRVQVGF PGLGCRHCTG SGAGRYFFSS IDSVATAGTV IEKHVMKCGA IDAGIKAIVA EAKTRHTAQR KNHPQGLQQK FFNRLWDRLR NSKIGGESSG VYFFEKKDSA DDAEHGEILS FSDHVAVLDY LHQSPRWREH GGDLLSAIHQ YYNSLQYGSR VYGTSAMPPN FSSEWLLSKI LPRKRVFNKA AMPG
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