Gene PHATRDRAFT_48121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48121 
Symbol 
ID7203437 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp257432 
End bp263216 
Gene Length5785 bp 
Protein Length1874 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182648 
Protein GI219124726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGACT CTAGTCCAGT TGAAAAGAAT CCAAATGACA AGGATGACGA AAGCTTTTAT 
AAAGAGGGGG ATGTCGTGCT TGCTGTAAGC CGAGAACCAC GGCAGCATGC TTCACGGGAG
GAGCTTGATG CTCCCGCACC TTGTGCATCT CCCGGAACCA AACGGACATT TACTATTCTG
GCTCATCCAG GCATGCCCGC GGCAACCATG ATAACCGGAA GAGCGCCAGT GGAGAAAGCA
AGTGTTCTCT CAGGACTTAG TTTTAAAATG CCCGACCTTG CGACCGTGCC GGTATCCGGC
TTGGCCATCC AGGGCACGAC TGCAAGCCCT GCAACCTTCG AACCAACGAA GCCACCGGAA
GGCAAGCCAG AAATCGTGCC GACCGCTACT ACAGTTAGCC ATGGAATTTT CGACGATGCG
GATGACGAAG AGGATGCCTC AATGCCGCTT TCGACCCTCA AGCCTAACAA ATCGAATTCG
TTTTTGGAAT TGCAAACGCA GAATTTTCCT ATGAAGAACA CTGCACCTAT GGACGTCGAC
GAGAAGGTGC GGGAGGCTCC ACGCTCCGAT CTAATGAGCA TTGTTTTGGG AAAAAGCCCA
GCAAGGAAAC GGGTAGCTGA TTCTTCTCCT GGTCCGATAT CACTTCCGAT ACCCGAATTA
CCACCGAAGT CGTTTGAGGC TGATGTAGTC GAGCAACCGA CAAAGCGCCG CCGAAAGAGT
GCCACCCAGA AGAAGCTGTT GGTAGCCAAA AAGGAGCGAG ACGCAGCCCA AAAACTGCTT
TGCGACAAGT TCGATCTTCG CGATTTTCTA CCTGAGGAGG TCTGCAAATT TTTAGGGTGT
AACTTTTGGA TATTTACGGT CGATCAGCTT CGGTGTGTGC TAAAATCGAG TCATGACGAC
GAATATCTTG CCCGGCAAGC CAAGGAGATT CGAAAAGAGA TCGTGGAATT ACTCAAGAAA
AAAGACGGCA TTTCGTCTAC CGGCAAAGGA CAGAACGCAA CGGGACCGAT GGATCATGGA
GAGAATAGTA CAAAAACAGC AAGTACTCTT CCGACTACTC AGATTACGAA CAGACAGCAA
AATCACGATG GAGGCAACGG AACCATGGAA AAGGATAAAG CCGAACAAAA CAAATTTGAA
AATGCCGGAT CAGTCCAAGC TCCCGATGAA ACAGTCTCGC TCGCTGGTCC AAATGTTGAA
GCCGAATCGA CTTTGCGAGG ATGGCTAACA ATGTTGCCGG CTGGCAATGA GAGCAGTGCG
ACCCAAGTGG CGAAACGATT TCCTTTAGAT GGGGCGATTT CATGCCTCAT TCCTCTGAAT
ATTCGCAATT TTTTTGCATC GGCTGGAATA AAAACTCTTT TTGAGTTTCT TTCAATAAAA
AAGACAGAGA CCGGATCAAT TTGCGATATT GAGCAAATGT GGAGAGACCA GTGCAATCTG
AAGAAAATGC CCGCGGTAGC GCTCGCCAAG CATCTACTCG GAATTGGGTC TCGTCTTGAG
GCCGCAATCT CTACTGTCCC TGCGGTTGGA AAAACTGACC AAAAATGGAT GAATGACCCA
ATAATTGTGT TAACGGGTGC TGCCCATGAG TTTCTTGTTG ACCGTATGGG AATTAAGAGT
GGTACCAATT TCCTGAATAT GCGAACCAAG GACTTGTCCG TACAACTGGT TTTTTGGCGC
AATAGCAAGG GTTTACCTCC ATTAAAAGGT TCAGGGAAGG TCGCAATGAT TTCGGGGTGG
AAAGCATCCG TCAAAGAATC CATTGAAGTT GAGCAGCTTC CCGGAAAGGT GTTACCCTTT
ATTGATCTAA CGGATCTGCC CCCTGCTGAT CTTCCAGAAG CAAGCTCAGA GCTAAGATCG
GAGGAACCGC GTGGATATTC CGGGGCAAAA CACAACGTCT CAAAATCGTC TGTTGTTGTA
ATGAAAGAAA AGCTACCTGT TCTGAACAAG CAAGGAAAGT ATGCATTGCA CTCGCCGCTA
CTTTTAGAAG AAGTCCTTGG GAAAACTCTA ACTTCATTTC TGAAATCTGC TGGGATTGAC
ACGGCGGCAA AGTTGTTCGG AGCAAAGCGA ACTCCAGAGT CATTGCTTGG TCGTGCGATT
CGAAAATCAC AAATTGCGGT TGACGCAGAC AAAGCTGTGA CTGAATGGTT GGATAAAATA
CGTGCGGAGC TGAAGCAATT TGAGCCGTTG CCCTCTCCGC GCCAAGTACG TGCCAAAAGG
GCAGTAGAAA AAACAGCAAA ATCTGTGACA GACCCGTTCG ATGCATTAAG CGCACTTACC
AAACGATTTC TCACGTCGAT GGACATATCA AATGCCGAGC AGTTTCTCTC TGCAAGGACA
ACCCATATCG CGAATGAATT TGTCCAGTTC AGAACAAAAG AGGGGATGCC TGACCTGAAG
GGATTGGGCG CGATTGCTTC AGTGAGCGGT TGGAAGGCTC AATGCAGAAA AGTTGCTCGA
GAAATGGGTC TTGATGCGAT AGGGAATATA GAGCCTGACG CAAAATCCCA AGTCACTCCA
ACGCTGGCGG CACCCAATGT TGCGTCCTCA AAGCCGAACG ACTACATCGA TGCTTCTATG
AAACGCTTGC CGGAAACAAA GAATCTTCCT TTTCATCCTG ATGTCATTTT CGGTGCTCCT
AGGCAACCAT TTTCAGTTCA GGCAACCCAA GGTGAGACTG GTTCTTATAT ATTGAGCTTG
AAAACATTGT GAAGCCCAGG CTGAAACCTC ACAACCAATT TTGTTGTTTT AGCAATGGGA
AATGTGCGTT TTCTCTTCCA TTTGTCGGTT CGGACTGAAG CGAGTAGCTC TCAGTTAGGT
CTCTTTCTAT GCTATGATGG TGCATCCAGT GGAGAAGTTG ACGTCACAGA GAACTGCGCT
GCTATTGTGG ACAATATCGC TGGGTCTCAG TCCTCTGCGA TCGTACTGCC CGTACTCCGT
GATGGCTCTT CGAAAGTCGC ATCAACTACA GAAATAGTGG ATCATCGTTT CACGTTTAGA
ACTGCAAAGG AAGGTTGTGG CTTGATCCGG CTGAGAAAAC ACGGCGTTCG GCCATTTCAA
GACCAGGATC TCAGCTTGTT AAAGGAAGAG ATAAGATCTT TCCTATTTTC GGGCAACACT
GACCGACCAT GCGAAGCCCC AAAATATGAT CCATACAATA TTCTGCTAGA ACGTGACAGC
TTGGGCAAGT ACGATTACCT ATTCTGTACA GACATCTTTT TTGAAAAAGG ACAGATGTCG
CGAGTACAAT TCATATCTGT GTCAGATTTT ATCCGTTCGC GTCGCCACGA AGAGTCCTCG
CAACCGTCTC GTCCACTCAT TGACGCCGCG CTATATCTGA TATCAAATAA AGATCTTGAA
AATGCAATCA TTTTTGTCGA AGAAGTATTA GCTGAGACGA CTGATTTCAA CGAGGCCGTT
GACATGATGT TGGCGTCGGA ATCGAATACG GAGAGATTGA CACATTTTGT CGCGGCTGCG
AGGCTGAGGC AGAGAGCGGA CTGGGTGTTT CGACGGATCG TGGATGCAAT GAGTTCTAAC
TACCGCGAAC GCAAAATGGC GACAACTCGG TACAAACTAT ACTTTGGTCG CCGCGCGCTT
TTGAATCACA GCAAGATCAA GAATTTGAAG CCCGAGATCT TGGAACAGTT AAGGACGACG
ATTGCAACCG AAATGCGTAA TGACTTTTTC TCGGGCATTG GTCTAGAGGG CGTTTATCGC
CAACTTCGAC TTTCCTATTG GTGCCCGTTG GCACAATCCG CATTGGATTG CCTGCTTGAT
ACGATCATAG GACATTTCGC CATGACAGAT GGAGCCAACA TTTTGTTCAA TGTTGAAGAA
AAGCTTCAAT TATCCTTTGC GAAACTTTTA CAGGAAGATC CGTGTGTAAT CCACTGTCTC
ATCAATCAAC ATGGTTCCAG CAAACAGGAG CTTGATGGAA GGATAGTGTG TGTTGACCAA
GAAAGCGAGG AAGCAAGGAA TACGACGCTG CGTACACAAG TTGACGTTGA AAACGGTACT
TCCAAAATAT GTACACATTG GTACCTAAAC CTACTATGGC AAGTGGCGAT TGTCGTTATC
TCCACCTTTG GCAACTTGTA TGAAGACATT GAGTTTCGTA AAGACCGTAT TATGAAAGCT
CTAAAGGGAG TGTTGGAACA ACGGACTGAT ATAAATGAAT CTTTCGGTCC TACTCTCGAC
ATGTTGAAAT TTGATGTTTT AGTGCCTCTC CCCCTCAGTG ATTGGAAGTG CTTTACGCCT
ATTCCACTCT CTCGCCAATT CTTTCTTGGT CTGGTCTGGC CGTTACTTCG CAAATTAGGG
TGGCGTTTGG ATGTTGGCCA AACCCCAGAT CACGTATCAT TTCTCGCCCC GTTTCGAAAT
GGTCACAATG CAAAGAAATT GAAACATGCG AAGCACCGTA TGATCCAGAA GCGAGCTCGT
CTTGAAAAAG AAACCAACCA CAACGTTGGT CTAGGAATTT TGTCAAAGTC GACGAAAAGG
ATCTGCATAT CAACTTCAAT TCGGGAAGAG TTCGCTGAAA TAGGCTCCCT TCGAAAAGTA
TCGACAAGCA AGGCTTTGGA TTTATTTGTC GAACACGTGC AAGACAGGTC CAATGAAGGG
AACATCTTCT ACAACAAACA AATAGAAGAC GTCGTCAATA GTATTCGCGT TAGTTTTGAC
GAGCTCGCTC CTTCTCTGGA CTCTGTCAGA AAAACTTTGG ATGGTCTGAA GCCTTCTGAG
TCGTTGGGGA GTGAGTACCT GTTCCAGTTT CTATTCATCT TGCCCAGCAT CCTTCGCCAA
TCTAAGATTC CCATGCATCA ATTAGATGAT GCTATCGAAA TTGTGAAAGA GCTCATTGCA
TTTTTAACAA ACATCTATGA CGTTGTTCTC GACGAAGAAT TTCAACCGCC CAAAGAAGTA
TACGCACAAG ACGAGGACAG CTCTGTATCC ACGTTAGCTG CACGGCTGTC AAGCAAGACA
GAAGAGGGAG CGGAACGGAA AGGCCCCATA AAGTCGTTGA CTGAGACTGT TTTGGAAGAG
GACAAACCAG ATCTTACCGA CTTTATGGTC GTTGTTCTAC AGCAAACTAT TCCAATCCGT
GCGACAGAAG AAGACATGGC AAGGAAAAAT CGTCGTGTTC AAGTTGGTTT TCCAGGTCTC
GGTTGTCGGC ACTGCACCGG AAGCGGGGCA GGACGATATT TTTTTAGTTC AATTGATAGC
GTAGCCACTG CCGGCACCGT AATTGAGAAG CACGTGATGA AGTGTGGTGC TATCGACGCT
GGGATCAAAG CCATTGTGGC TGAAGCCAAA ACTAGACATA CGGCCCAGCG GAAAAACCAT
CCACAAGGAC TGCAGCAAAA GTTTTTCAAC CGGTTATGGG ACCGTTTGCG TAATTCCAAG
ATTGGAGGTG AAAGCAGTGG GGTGTATTTC TTTGAGAAAA AAGATAGTGC GGACGACGCC
GAGCATGGTG AGATCCTTTC GTTTAGCGAT CACGTTGCAG TGCTTGATTA TTTACACCAA
TCCCCACGGT GGAGAGAACA TGGTGGTGAC TTGCTCTCTG CGATCCACCA GTACTACAAC
AGTCTCCAAT ACGGTAGCAG GGTATACGGC ACGTCAGCTA TGCCCCCAAA TTTCAGTTCT
GAATGGTTGC TGAGCAAGAT TTTGCCAAGG AAAAGAGTTT TCAACAAGGC TGCTATGCCC
GGCTAACAGA CCAAGGCATG TCACAAGCAG AATAGAAGAA CCAAAGAAAT AAAAAATGAG
AACGATAATG AACTCTTACA TTAAC
 
Protein sequence
MEDSSPVEKN PNDKDDESFY KEGDVVLAVS REPRQHASRE ELDAPAPCAS PGTKRTFTIL 
AHPGMPAATM ITGRAPVEKA SVLSGLSFKM PDLATVPVSG LAIQGTTASP ATFEPTKPPE
GKPEIVPTAT TVSHGIFDDA DDEEDASMPL STLKPNKSNS FLELQTQNFP MKNTAPMDVD
EKVREAPRSD LMSIVLGKSP ARKRVADSSP GPISLPIPEL PPKSFEADVV EQPTKRRRKS
ATQKKLLVAK KERDAAQKLL CDKFDLRDFL PEEVCKFLGC NFWIFTVDQL RCVLKSSHDD
EYLARQAKEI RKEIVELLKK KDGISSTGKG QNATGPMDHG ENSTKTASTL PTTQITNRQQ
NHDGGNGTME KDKAEQNKFE NAGSVQAPDE TVSLAGPNVE AESTLRGWLT MLPAGNESSA
TQVAKRFPLD GAISCLIPLN IRNFFASAGI KTLFEFLSIK KTETGSICDI EQMWRDQCNL
KKMPAVALAK HLLGIGSRLE AAISTVPAVG KTDQKWMNDP IIVLTGAAHE FLVDRMGIKS
GTNFLNMRTK DLSVQLVFWR NSKGLPPLKG SGKVAMISGW KASVKESIEV EQLPGKVLPF
IDLTDLPPAD LPEASSELRS EEPRGYSGAK HNVSKSSVVV MKEKLPVLNK QGKYALHSPL
LLEEVLGKTL TSFLKSAGID TAAKLFGAKR TPESLLGRAI RKSQIAVDAD KAVTEWLDKI
RAELKQFEPL PSPRQVRAKR AVEKTAKSVT DPFDALSALT KRFLTSMDIS NAEQFLSART
THIANEFVQF RTKEGMPDLK GLGAIASVSG WKAQCRKVAR EMGLDAIGNI EPDAKSQVTP
TLAAPNVASS KPNDYIDASM KRLPETKNLP FHPDVIFGAP RQPFSVQATQ AMGNVRFLFH
LSVRTEASSS QLGLFLCYDG ASSGEVDVTE NCAAIVDNIA GSQSSAIVLP VLRDGSSKVA
STTEIVDHRF TFRTAKEGCG LIRLRKHGVR PFQDQDLSLL KEEIRSFLFS GNTDRPCEAP
KYDPYNILLE RDSLGKYDYL FCTDIFFEKG QMSRVQFISV SDFIRSRRHE ESSQPSRPLI
DAALYLISNK DLENAIIFVE EVLAETTDFN EAVDMMLASE SNTERLTHFV AAARLRQRAD
WVFRRIVDAM SSNYRERKMA TTRYKLYFGR RALLNHSKIK NLKPEILEQL RTTIATEMRN
DFFSGIGLEG VYRQLRLSYW CPLAQSALDC LLDTIIGHFA MTDGANILFN VEEKLQLSFA
KLLQEDPCVI HCLINQHGSS KQELDGRIVC VDQESEEARN TTLRTQVDVE NGTSKICTHW
YLNLLWQVAI VVISTFGNLY EDIEFRKDRI MKALKGVLEQ RTDINESFGP TLDMLKFDVL
VPLPLSDWKC FTPIPLSRQF FLGLVWPLLR KLGWRLDVGQ TPDHVSFLAP FRNGHNAKKL
KHAKHRMIQK RARLEKETNH NVGLGILSKS TKRICISTSI REEFAEIGSL RKVSTSKALD
LFVEHVQDRS NEGNIFYNKQ IEDVVNSIRV SFDELAPSLD SVRKTLDGLK PSESLGSEYL
FQFLFILPSI LRQSKIPMHQ LDDAIEIVKE LIAFLTNIYD VVLDEEFQPP KEVYAQDEDS
SVSTLAARLS SKTEEGAERK GPIKSLTETV LEEDKPDLTD FMVVVLQQTI PIRATEEDMA
RKNRRVQVGF PGLGCRHCTG SGAGRYFFSS IDSVATAGTV IEKHVMKCGA IDAGIKAIVA
EAKTRHTAQR KNHPQGLQQK FFNRLWDRLR NSKIGGESSG VYFFEKKDSA DDAEHGEILS
FSDHVAVLDY LHQSPRWREH GGDLLSAIHQ YYNSLQYGSR VYGTSAMPPN FSSEWLLSKI
LPRKRVFNKA AMPG