| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48077 |
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| Symbol | |
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| ID | 7203453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011684 |
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| Strand | - |
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| Start bp | 123092 |
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| End bp | 124832 |
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| Gene Length | 1741 bp |
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| Protein Length | 444 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182620 |
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| Protein GI | 219124668 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00714324 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACCAGTCCG TGGTGTCGAG CGTCACGGAA ACGACCGATC GGAATGCGCC GTCGGACCGG
GAACATTCCG TGCCGGGGCG TCTGCGCCCT CCTCGTCTCG GGCTGGTGGT GGTGGCGGAA
CGACAGAGTG TGGCGTTCCG ACACACCGTC CGCTACGGAT ACGCTGATTC CATCCCGTCC
CATGGCCTGG CACGGTCCTT CCTCGCGGTC CCGACAACAA AGCCAACGAT CCACGTCCGA
CTCGCTCGCG GCCTGTCTTT TGATCAAAGA CGACAACGAC ATTCTCGACG AATGGATTGC
CTACCATTAT CACGTTTGGA ATCTCCGTCA TTTGCTCGTC GCCGTCGACC CCAGCAGTCG
TACTTCGCCC CGCGCGACTC TCACGCGTTG GACGGAAGTG ACCGATCTGG ATGTGCGAGT
CTGGGACGAC GTCGATTATC TGCCGGAATC CTTCCGGACG CTCGGTTACC ACATTCCACC
CCGCTACGTC TCGGGCGACG CCCAACGCTC CCAGTGGCAC GTGGGTCACG AATCGGCCGC
GCAAGTCGTC GCCGATCGCA CCCGTATCAA CAATCACCGC TACCGTCAAG TCACACTCCT
CACACACTGT TACCGCCACT GGCGGGAGCG GAACGCAACC TGGGTACTCC ACGTCGATAC
CGATGAATAT TTGACCCTCA ATCCAATCCG GCGTCGGCCA CACACGACGG CAGGGTCGCC
CGTTGTACCG GTCAAGCTCG TCCAGCCCGG CTGTTTGTTC CGGTTCTGGA ACGCACTGCT
CCGGGATAAC GTCCAAGCCC GCGCCGCCAA CGCTCACCAT TCTTGCGTGT CCATGCCGCG
ACTCTTGTTT GGTGCGATGG AAACCAATCG TTCGGTCGTC ACGACGACAA CCACTGCTGG
CACAGCCGCC GCGAATCCCC AACGCTTCGA AACCCTCCGC TGGCGCTACC ACGCTGCCTA
CAACGATACC GTCTACAACG CCCAACCCAA AACACTAGTG GACGTCTCCC GGGTACCCGC
CCCCGACGAA CTCTGGCAAC AGGCATTTTC CATACATCGA CCATCCAAAG TATTGTGTCG
ACGCATCGAG CAACTCAATC TGCGCACACC GAACCGTTAC CCCCTCGCCG TCTTTCACTA
CCTCGGAACC TGGGAACGCT ACGTTGCGCG TAACGATACG CGCCGCTCCC GACGTGTCTA
CGACGCCAAG GCCGCCGCCG GTGCCGGTGG ACGACCCGAA GATTCCATGG AGGACTGGTT
CGATGGCTGG GTACACGACG TCGGGATCGA GACGGCGCGC TATTTGTTGC GCGACTATTT
CCGCTACCCC GGAAACTCTG TCACAAATGC GTCACGGTAC TACGACACGT TGGCGTAGCG
TTGTTCCTAA CCGTGATAGG CACGGAACGC AAGAATTGGT TCCAAGCTAG TCAAGAACAA
TTGTGCCTCT CGACAAACGA CGTAAGGAGA TACAGTCAGA CTGCTTGGCG CCTTTACATC
CACGCAGCCA ATCCTACTGG ACGACGAGGA AAGTCCAAGA CCTTTCCATG GACCACGGTA
ACTATCTCAT TGCTCGACGG GGATATTTTA CAAACACGAT AACATTTTGG ATCAGTTAAG
CTTGAGTAAG CTTGCTTCCT CGGAAACACA CACGACAACT ACTACGCCAA TCAGTAGACT
AAGTGAGGGG AGGGGATACG CTGGTTTCCT TCGACCTCGA TAGATTTGTG GACTCTCGTC
G
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| Protein sequence | MRRRTGNIPC RGVCALLVSG WWWWRNDRVW RSDTPSATDT LIPSRPMAWH GPSSRSRQQS
QRSTSDSLAA CLLIKDDNDI LDEWIAYHYH VWNLRHLLVA VDPSSRTSPR ATLTRWTEVT
DLDVRVWDDV DYLPESFRTL GYHIPPRYVS GDAQRSQWHV GHESAAQVVA DRTRINNHRY
RQVTLLTHCY RHWRERNATW VLHVDTDEYL TLNPIRRRPH TTAGSPVVPV KLVQPGCLFR
FWNALLRDNV QARAANAHHS CVSMPRLLFG AMETNRSVVT TTTTAGTAAA NPQRFETLRW
RYHAAYNDTV YNAQPKTLVD VSRVPAPDEL WQQAFSIHRP SKVLCRRIEQ LNLRTPNRYP
LAVFHYLGTW ERYVARNDTR RSRRVYDAKA AAGAGGRPED SMEDWFDGWV HDVGIETARY
LLRDYFRYPG NSVTNASRYY DTLA
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