Gene PHATRDRAFT_48047 details

Gene Information

• Locus tag: PHATRDRAFT_48047
• ID: 7203405
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: +
• Start bp: 4964
• End bp: 12273
• Gene Length: 7310 bp
• Protein Length: 2252 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002182462
• Protein GI: 219124338

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.480649
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGCGCC TTGCTTGTAG AATGTCCGGA ACTCCCGATC AGCCGCACGA TCCCGCAGAC 
GTCGCTATTC GACAGGGAGA AATGAACATG GCCTCGTTGT TGAATCCTAT GCCTCCCATG 
GCAATGGACG ATGAGCAGCC TCTTCGCCAT ACACCTATGG AGGACAGCGA CCAAAGTCGA 
AGCTCGGCTG CAATTTTTGT ATCCCGTGTT TCTCAGCCTC TGGTAACCTT GCCTCCTTCT 
TCAAGACATT TGGCGCGTAC TACGGGGTCT TCGACGCGTC ATGAAGGAGG CGAAAATCCA 
GTGTGGTTGG CTCAGCCTCC CTCAGTGTCA TCCATCAGTC ACCGAAATAT CTGTGATTTT 
GGAAACAAAG GATTCGACAG CGACCGGGGT TGGTATTTGC GAGAGTCTTG CTTGCTTTCG 
ATGGAAGTTG GCAGTCAACG TCAAGTCGTT AGCACGCCGT GCCGACGGGA CTGCAATGGG 
CAAATTATGC CCGTGGCCGT CCAGTCACCT CTCATTAGCC GCGACGAGTC TTTTTTTCGC 
GATCGCAAGA AGGCCCTCCA AGCCGCGATG TCCGAGCGTT CCAAGTACGA CATTCAACTC 
AACAACGAAG TCGGGGCGTT GGGAGGCGCC TGGCGTGGCA TCGTCAGGAG GTTCATGTTG 
TGGGCCTTTG ACAACGTCAA CGCCTTGCAG CTGAGTCGGG CCTTGCAGCT TCAGTTGCCC 
TTTCAGACGG GCTACGAGTC CTACTTGACC TCGCAAGTCA TCGAAGCCCT TGACAGGGGC 
GATCCCAGCG AAGTTGCTGA TGTCTTGAGT GCCGCGTTTC TCAACCGGAA TGTCTCTCGC 
GTCATGGTCC AGAACCTGGG ACCTCGGTAC GATCTTTTGT GGCATTGGAG CACCGCCATC 
ACCTGGAATC GGGCCTTTGA CGCTTGGGGG CAGTTCCCGC TCGTAGGCAT TACGGGTTTC 
CCTGCCACGG AGAACTTTCC TTCCACACGC AACCACGCCT TAGCATCCAT CTTTCGGGTG 
CTATTGGGAC AGGGTAACTG GATCACTCGC GTGGTCACGC AAGGACGAGA AGGAATATTG 
ACGGACAACC CAAACAACAA GGCGCAGAAT CTCGCACCCG AGTCCAACGG CTTTGAACTT 
GCAAACCGCA ACCAGTACGG AACTTACTTC GGACGCGTCA AGACGAACGA GTTTCGATAC 
GCACATCGGC TTCCTACTGA CGAGTCAATC GTACGGACCT TTGTCGCTAG CCCGATGGCC 
ACGATGTCCA ACAATGGGGT TGTACACGTT CTTCGCATGC TTGACAAGCA CTGGCACAAT 
ATGCTCTCAC AAGAATGGGG CAATTTCGCT CACCAGCGAA TGGAACAGTT GGACCCCTTT 
GAAACTCTCC GTTTCCATAT GCCCCTAGTC CTCGTTACGC TCTCAAATTT GCGAGGTCGC 
AACGCATGGG ATGCCGAGGT TTTGGGCCCG GCTGTTCGCA AGTTGCAGGC TCTGAAGCCT 
GGTCTGGATA CTGCTGCTGC TTGGAAGCTG GCAAAGGAGT TGGAGGATGA TGTAGCGGTG 
ACTGTATCGG GTGGTGTTGC CTCCGTCTTT GTACCCCTCC GATCCTGGTT GAAAGCTATA 
AGAGAATCCT TGGACCGTTT GGAACGTAAA GCTGGAGAAG TCCTGAAGAT TGTCTCGTCT 
GTCGAAATGG GCATTCGCCT CGGGCATGAT CTTGTAACCC AAGTCAGTTG GAAGGTGCCG 
TCGGATAGCG TTTTGAAGGC TGCAATTCTA AATCATATCC GAGGGAAGGA CAAACAAGCT 
GTCATAGCGA ACGATCAGGA TGCTGCCGAC GCACCAGACG CGAACGCTGT GGACAGTTGG 
CGTATCAGGA GTGCTCTTCA AAAGACAACC CCGCGTGATA TGCGCACGTT GATTGAGCTT 
GTCAAGGGCA ATCTCGAGCA CATGAAGGCT GCCCAGTTAC TCATTGGACG GGTCAAGACG 
CTGCTCCAAC GAGAACTTCG TCGTGGATAT TTGAACCAAG CTATCCGTGA CTTGTCTAAA 
GGACCATACA TCAACGGTCC TTTGATGCGG GATGAATGGT ACTGGCTAGA AGAGGAACAC 
GGCCAAGGTC TTCACATTTA CATAGGCAAG ATTCCTGACA GCGGCCTGCA TCAATTCATC 
CACGTCGATT CCGGCAACGA TAAAACAATT TCGTTGTCGA ATGGAAAGGT ACTAGCGCGA 
GCGTACATTC CCGTATCGGA ATCCATTTCT CGAGCGCAAA AAGTAAGTCC AAAATGATCA 
CAGTCAGTGT ATCGGTCGGC TTTGCTTTTC CCGGGTTCGG GTTCCTCCTC TTACACACAA 
ATCCGCATTG TTACTAGGCG TTTATGACGA TTGAGCTCGA GTATGGCAAG ACTTTCAAGT 
ACAGTGCTTT TATGGAGTTT TCCATGCTCC GGATCGCCCT TCAACGACTT GGTACGTGCG 
GGATGCAGTG GTCAGTCGTT GCTCATTGAG CCCTTCTAAC GCTTGACGGA CCTTTACCGT 
ACAGTTGTTG TGTCTCAAAT GAATTGCGAA GAACTCGACA ATGCGCGCTT GAACGTTCTT 
CGGGAAATAC AGCGTTCCAA GCAAACCGTA CTCGGTCCTG AGGACCTTAC GCCTGGCAAC 
ACGTACTATA CATTCGACGA ATCCAAACGA CAGTACATAC CGTTTCTTTG CGAAACAACG 
AATTCGGTTT CCACGCAGTC GAAGAGAGCC AAGTATGTGC GTGCACCGCC ACAATCCGTT 
CTTGTGGTGG GAGGAGGCCC GACCGGGCTC TTGACCACAA TTCATTGTGC TGAAGCATGC 
TTGGCTACTG GAGGAGTCAT GAAACTCCAA GAGGCCCGTG ATGCATTTGC CAAAGGAGGG 
TCTACATTTG AACGAGCCCA AGTCGTTCGA CTTGATGCTC GTTGGATTTC CATGCTCCGA 
TACCATCTCG GTACAATTTT TGAGGACGTT TACATTCCAG CGTCTGGGGA AACCGACGCA 
CAGTTGGGCA ATACCCTGTA AGTCAGAAGA CTGTTTCAAG TACGCCTTTT TATTTCGCGA 
TTCTGGCTGA AGTACTCACC ATGATACTGT GTTGACAATA CAGACCAACG CAGGGCTTTG 
TTGAGATTAC AATCAAAGAC TTGGAGAGTT CGTTGCACAC AGAAGCGTCG CGTCTTTGGT 
CTCGAGGTAT CATTTTCGTC CATACAGACT CCAAGGCCCG ATATGACGCA ACTTCGAACT 
CCATGATAAA GCAGGGCAAA AATCTGAAAG ACGGTGATGT CGTTTTGCGT CCGGTGGATT 
CGCATGGAAA GGATTCTTCT CACTTTCACT CCTGGAAAGT TTCGGAAGTG CGGTACACAA 
AGGTATTAGG GATCGAAGAC CTCAAAGTTG GGGAGGAATA CGGAGTTTGG ATTCATCAAG 
AACAGAAAGT ACTCCCGTAT ACACTCGTAG CGGTGGATCT CGATACCGAG GTATGCGCAT 
CATGAAATTG ACTGTCAGCG AGCGACTCGC AATGTCTCCA TGGCCATGCC CTAACCTTCT 
ACTCTTGTTT TTCTCTGAAG TTGTACACAT TCCGATCCCA TTCGAAGGAC AAAAGTAAGT 
TGTGTGTCAA CGCAAAGAAT CTAGCCTCCA TCTACCCTCC CGGAACGACT ACGAAAGCCC 
ACGCGGGTGT CCGTGAAGTT GTGTTCGAGG GCCTAGGAAA CCGACAAGAG GGGGGACTAC 
CGAAGCAAAC AGTTCCATTT GATCCAATTG AAAATGTCAA TTTTACGCTG GATCTCGGAA 
ACACCCATGT TGTCGAGGCC ATCGGGTAAG TACTAACTTG GCCATCAACG CTGTAATGCG 
AAAGTTTATC GCTTTCGGAT ACGCACCCTA ATTCGCCTCG TCTGTTTCTC GGTCTCGTAG 
AAAACAATAC CCCTCAGACG TTCACATCGG AGTCACCACA AAAGAGCCTT ATGGTGTGTG 
TTGTATGCAG GGGTTGAAAG TGTCTATGGG TATGCACAAT TTTGGAGAAA AACGATGGGG 
GACTGGGATC CTGGATGATA TACGTTCGCA AAACGATCAG AACACAAGAA TCATCGGTGA 
TTTCACCAAG ATGGTCAGGG TTGTGCCCAT TGTAGAGCAC ATGTATCAGA CCATTTCCAA 
GGATAAGGAT TGGCGCATGC ATTTCAGCAA CGTCATCAAG GAAAGTGGGT TTCCGGAAGT 
GGCCGAGCTG CAACCTGTGT TTTCCAATTT GGTTGAGGGA TGCCGATTGC TCTCGCAAGC 
ATCGTTGAAT TTTCGCAGAA AAACTTTGCA GACTCGTTTT TTCGAAACAG GGGACAATTA 
TTATCTCGGA ATGGAATTTC CCAGAGAATA CGACGCCTGG AAGAATGCGT TGTCATTTAG 
CTTGGTGAAG AAATTGTCTG CAACTGGAAT AAACTCCAGA GCGGTCGAAC GTCTCAGGTC 
ATCTTTGATG CATCATATTG ATCGTCTGTG GTACAACGGG TGCTTGGAGA CTATCCGAAC 
CGGCGATGTT TACAATCCAG GAGCACGCGA ACGCGTTCCT CGCCTTTATC TTATCAATTC 
GTACATGGAA ATGTCCCTGA GCGCCTTGCC AATCGGTGAG AGCTTTCGGC TGGTCTCCGA 
GCCACAGTCG AAGTACGAAG TTCTGGCGAT TTCATCGTCC ACGATTCTTG TGCGTAACGT 
TGAAGGGTAC TTATCTAAAT TCAAGAAATC GACAAAGGTC TTGCGTGAAG GAAATCTGAC 
TCGGGGTCCC GATGGGAACC AAGAGTCCAA AGTGGTAAGA GAACTGTTAA GATACTTTCA 
TCGGTTTTGT GATTGTCCGC TCAACATGAA ACTCACATCA ACCAATTTTA ATGCAGGCGT 
TGGCTACGTT CGATGTGGGT CACTATGTCA ATCATCGCAC CATGCGTCTG TTGAACAAGG 
ATCAGGGCTA CGTTTTCGCT TTCATCGGAG ACGAGCAAGC AACACCTCAC TTTATGCGGT 
ACAGTGGGTT GACTGGCGCA TGTATCAACG CCATGTCTTT CAACAACTTT ATCACGGACG 
CTGGTCGCGG TGTATCCTTC GAGGAAAGAC TGCAGCAGTA TTCCGAAGAG ACGGACTGGT 
CAAATGGAGA AGTGGTCCAG CGAGGAACTG GTGCAAATTA TGGAGACGAT GGGTTTTTAC 
GACCGGAATT CTCGTACCGC GACGGAGTAG CGTTCTTGTA TTCAAAAATA GTTGAATTCG 
GGGAAATGGG AAAAGATGTG AATAATCTGC TCACCCGAGA CTGGATGGTG AAGCTTACAG 
CTTCCCTTGT ACCTAGAGGC ATGGAACTAA ACCAAGTGTT CCTTGAAGGT CTGCAACGGC 
ACTGGAAGGC AGCTGTATTT GACAAACTGA TGGCCTCGGT GAAGTCCGAT ACTCCTGTTG 
ATGAAAAGGG AGCTAATGTT GTGGATGCGC TCCGATCTAG CAGCAGCACT CTAGTGGAGA 
AGAATGCTGC GTCGCCTGTT TATTGGGACG AGTTGACAAC GAGTTTACAA TTGGACACCG 
CCACCAAAGA CGTTCTCTCC ACACGACATT TTCCCGTTGC GAAACGGCTT TGTGAGATTA 
TCAATGAGCT GATCGATTTT GCCAGCAAGG CCTATCTTTA CAACGAGCGA ATTAGTTCAG 
AGCTGAGCAA CCAACCGAAA TCAGTGGACT CGCTTATTGA CGACTTCTCC GTGGAGGCCC 
AAAACTTCGC GAACTCCTTG ACCCAATCAG CAGCGTTTGC AGCAGGTGTG CTTGCGTTTC 
GTCTGGTGGG TAGCAACGTC GCCAACACGT TTTCCGCAGT GTTTGCGGGG TTAAATATTC 
TCATTGCGTT CGGAACCATG ACCAACGTAT CTCGTTATAA GATTCGAAAT GAGGAATGGC 
GCGTCTTTTT CGCAGACCAG AAGTTTTCTG GCGTGAAGTG CGCAGTGTTC GCTTTGTTAA 
GCAAGGATGA CCAAGATTCT ACACCATTGG AGCAACATCC TTTTATTGAT ATATTGGAGA 
AACGAGTCAA GTCATTCAGA GAGACCGTTG GCTACTATGG GTACAGCAAC CCAACTGAGT 
TTGATGAGGC GTACCAACAA TTGAAGTCTC GTGCCAACAA CTCGAGTGAA CTCCAAAATT 
TTCGAGATTT GTTGGTGACG GACCTGCTTG TGGATACGTA CCATGTCAAC AGCTATGTGC 
AAGAAAAGCT TGTTGATGTT TTCCGAGTCC TCGACGAAAT GATTTTTTTG CTCGATAGCA 
GGAAGTCCAA GTCCGCAAGC AAGGCCAAAC AGCTGTTTGA TCAGTTACTC GCGTATGACT 
CGGTGTTGGA AGACTCTTTG CAGCGAGGGC CGGTTCGCTT TGGTTTCATC AAGCAGCGAA 
AGTTTTTGCA CTGGAATTTG ATAGCAGCTG TCCGGTACCT CAGTAGGGTA TTCTGCTGCT 
TTTCGAGACC TCGTCAAAGT GACCGCGCTT TGTTCCAAAT CGAAACTCTC GGTATTGTGA 
GAAGTCTTCA ATCTCTTTCA AAGGAACAGG ATTCGAAAGT TCTGCGGCGA GAGAGCAGAG 
ACTTTGAGAC TCTCTTGTGG GCAACACGCG AAAGCGAGAT TGCGTCCTTA ATATTTCTCT 
CGGGCTTCTT TGTTTTCTTC GCCTCCGTTC TTTTCAGTGT TGCTCGAATT TTCAACATTG 
AATCGCTCGA AAATGCCGCA TTCTGGGCTA ATGCGATATC CTCGTTTGGC GCGGTTTTGG 
CCGCATTCCA TCTTATCCGG AAATTCTCCA TTTTGTTCGG TCTATGGGCA ACCCTTTGGG 
TAAAGACAAG CAATACGGTG GGAATGGATC ATATCAATAT TCGTCGGATT CGTGACGTAA 
CGTCCATTCA GGCTCTTCTG ACCTTAACCC GTCTTGTAGC TGCCGTTGGT GCTGCTGTGG 
CTTTACCTTG GTCAGTGATA GAGAACGCTT TTCCTAGTGT GATTACGCTG GACGAAGACT 
ATCCATTCTG GCTTGCTTCG GGTGCTGTGT GTGCCGCAAT TCTAGCGACA GTGTTTTTCT 
TCGTGGTTGA GTATGTGGTC CGGTACAATC TCAGCCCCCA ACTTGGACCT TTTGTCAGTG 
AACTTTTCCG AGACGAAATT GAAGCCATGT TCAACGACTT GGCACAGCGA CAAAATGATA 
TAGACACAAA GGTTGTCCAG GACCGTGAAA ACTGGGAGTA TGTTGCGAGA GAATTTTTGC 
ACAAATACCG TTTCGATACG GTGTTTGCAG CTGATCGGTT TGGGACTATT TTTCAATACA 
TACAAGCTGG AATGGAAGGG AGCGGTGATT CCAAAATTGA GAATGATTAA 

 

Protein sequence

MLRLACRMSG TPDQPHDPAD VAIRQGEMNM ASLLNPMPPM AMDDEQPLRH TPMEDSDQSR 
SSAAIFVSRV SQPLVTLPPS SRHLARTTGS STRHEGGENP VWLAQPPSVS SISHRNICDF 
GNKGFDSDRG WYLRESCLLS MEVGSQRQVV STPCRRDCNG QIMPVAVQSP LISRDESFFR 
DRKKALQAAM SERSKYDIQL NNEVGALGGA WRGIVRRFML WAFDNVNALQ LSRALQLQLP 
FQTGYESYLT SQVIEALDRG DPSEVADVLS AAFLNRNVSR VMVQNLGPRY DLLWHWSTAI 
TWNRAFDAWG QFPLVGITGF PATENFPSTR NHALASIFRV LLGQGNWITR VVTQGREGIL 
TDNPNNKAQN LAPESNGFEL ANRNQYGTYF GRVKTNEFRY AHRLPTDESI VRTFVASPMA 
TMSNNGVVHV LRMLDKHWHN MLSQEWGNFA HQRMEQLDPF ETLRFHMPLV LVTLSNLRGR 
NAWDAEVLGP AVRKLQALKP GLDTAAAWKL AKELEDDVAV TVSGGVASVF VPLRSWLKAI 
RESLDRLERK AGEVLKIVSS VEMGIRLGHD LVTQVSWKVP SDSVLKAAIL NHIRGKDKQA 
VIANDQDAAD APDANAVDSW RIRSALQKTT PRDMRTLIEL VKGNLEHMKA AQLLIGRVKT 
LLQRELRRGY LNQAIRDLSK GPYINGPLMR DEWYWLEEEH GQGLHIYIGK IPDSGLHQFI 
HVDSGNDKTI SLSNGKVLAR AYIPVSESIS RAQKAFMTIE LEYGKTFKYS AFMEFSMLRI 
ALQRLVVVSQ MNCEELDNAR LNVLREIQRS KQTVLGPEDL TPGNTYYTFD ESKRQYIPFL 
CETTNSVSTQ SKRAKYVRAP PQSVLVVGGG PTGLLTTIHC AEACLATGGV MKLQEARDAF 
AKGGSTFERA QVVRLDARWI SMLRYHLGTI FEDVYIPASG ETDAQLGNTL PTQGFVEITI 
KDLESSLHTE ASRLWSRGII FVHTDSKARY DATSNSMIKQ GKNLKDGDVV LRPVDSHGKD 
SSHFHSWKVS EVRYTKVLGI EDLKVGEEYG VWIHQEQKVL PYTLVAVDLD TELYTFRSHS 
KDKTSIYPPG TTTKAHAGVR EVVFEGLGNR QEGGLPKQTV PFDPIENVNF TLDLGNTHVV 
EAIGKQYPSD VHIGVTTKEP YGVCCMQGLK VSMGMHNFGE KRWGTGILDD IRSQNDQNTR 
IIGDFTKMVR VVPIVEHMYQ TISKDKDWRM HFSNVIKESG FPEVAELQPV FSNLVEGCRL 
LSQASLNFRR KTLQTRFFET GDNYYLGMEF PREYDAWKNA LSFSLVKKLS ATGINSRAVE 
RLRSSLMHHI DRLWYNGCLE TIRTGDVYNP GARERVPRLY LINSYMEMSL SALPIGESFR 
LVSEPQSKYE VLAISSSTIL VRNVEGYLSK FKKSTKVLRE GNLTRGPDGN QESKVALATF 
DVGHYVNHRT MRLLNKDQGY VFAFIGDEQA TPHFMRYSGL TGACINAMSF NNFITDAGRG 
VSFEERLQQY SEETDWSNGE VVQRGTGANY GDDGFLRPEF SYRDGVAFLY SKIVEFGEMG 
KDVNNLLTRD WMVKLTASLV PRGMELNQVF LEGLQRHWKA AVFDKLMASV KSDTPVDEKG 
ANVVDALRSS SSTLVEKNAA SPVYWDELTT SLQLDTATKD VLSTRHFPVA KRLCEIINEL 
IDFASKAYLY NERISSELSN QPKSVDSLID DFSVEAQNFA NSLTQSAAFA AGVLAFRLVG 
SNVANTFSAV FAGLNILIAF GTMTNVSRYK IRNEEWRVFF ADQKFSGVKC AVFALLSKDD 
QDSTPLEQHP FIDILEKRVK SFRETVGYYG YSNPTEFDEA YQQLKSRANN SSELQNFRDL 
LVTDLLVDTY HVNSYVQEKL VDVFRVLDEM IFLLDSRKSK SASKAKQLFD QLLAYDSVLE 
DSLQRGPVRF GFIKQRKFLH WNLIAAVRYL SRVFCCFSRP RQSDRALFQI ETLGIVRSLQ 
SLSKEQDSKV LRRESRDFET LLWATRESEI ASLIFLSGFF VFFASVLFSV ARIFNIESLE 
NAAFWANAIS SFGAVLAAFH LIRKFSILFG LWATLWVKTS NTVGMDHINI RRIRDVTSIQ 
ALLTLTRLVA AVGAAVALPW SVIENAFPSV ITLDEDYPFW LASGAVCAAI LATVFFFVVE 
YVVRYNLSPQ LGPFVSELFR DEIEAMFNDL AQRQNDIDTK VVQDRENWEY VAREFLHKYR 
FDTVFAADRF GTIFQYIQAG MEGSGDSKIE ND