Gene PHATRDRAFT_48046 details

Gene Information

• Locus tag: PHATRDRAFT_48046
• ID: 7203385
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011684
• Strand: -
• Start bp: 1897
• End bp: 3989
• Gene Length: 2093 bp
• Protein Length: 678 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002182595
• Protein GI: 219124615

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0330655
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATG CTGTGTTCTT CTCCGTCGTG GCTCTCGCCA AAGCGGGCAT TGAATGTTGT 
CGGAACGCTC AGATCTGCAA GGATGAGGCA GCCCGGATCG GTAAGCGTCT GACAATAGTG 
GTCGCGCGAG CACACGAATG GGGAGCTGTT TGTGAAAGTA CGCGCCTTGC TCATTTTCAT 
GAAGTTGTGG AGAATGTCTT CCTGCGCTTG CAAGCAACCA CATCGTCTGT AAACAGGCGC 
TCCTTGTGGA ACAGAAAATT CAAGATTGCG TTACAACCCC AGACTATACT CTGTGAAATC 
CTTAAAGCAG AGAGCCAGCT GAATACTGCC ATCAATGATC TTCAGATGGA GCAGTCCAAT 
GCCATCTTTT CGCACCTCCT TGACGTCTCC AAAGGAGTTG CGGATTTGCT AGATCAGTTT 
GGCGCTCTCG CTCTGAGCAA GTCGGATCCT TCTGCAACAA TCCAGCGGCA AGTTGAAAAG 
GCCTTGGCGG AAACTCAAGT TCGAGCTCCC CAAGTTGCCG TTGCCAACCC CGATGACGTT 
AGCCAAGATG GTGGACGAGG GCAAGATCCT ACCTTAGCTA CAAGCGGTAT GAAGGTTTCG 
CACCAGTATA AGACAACCTT TTGTCCATCC AAGGATGATG TACTCGCTAT CTCGCTCCAG 
CCATCCTTGC TGAAGTTTTG TGATGACCAC GAGAGCCTCC TCGGAGGTGG AGGTTTTGCG 
GAAGTCTTTC GCGGAACATA CAACCTCCAA CCTGTCGCCA TCAAACGCCT CAAGGTATAT 
CGGGGAGATG TAAATTCTCT CTCGAAACTT CAGATCGCCC GCGATGTGGA ACAACTAGCC 
GCGGAAGCCC TTCTGACGCA CAAATGCGGT ACACATTCAA ACATCATTCA TGTTGTTGGA 
TGCCTTAGCA TACTAAGCGA AGTCGAGAGA CCCTTGCTTG TCATGGAACT TATGCATACG 
ACTCTCTTTG ATGTTATTCA CGATCGTGTT TTAGCAGATG CTCTGGCATT TTCCCGTCGT 
CTCTATTTGT TGAAAGGTAT TGCAGGCGCG TTAGAGTTTC TTCATTTGCA AGGCATTGTC 
CATCACGACA TCAAGTCTCT CAACATTTTG TTGAACAAAA AATTGACGGT TGCCAAGCTG 
GCAGACTTTG GGAGTCAAAA GTGAAAGGCC TGAACACCAC AAAACTCCGT CTTGGAACAA 
TCCTAGCAGC TACCAGCCAT CAAGGCAACC AGATTGCAGG TACAGCCGCC TACCAAGCGC 
CCGAAATCCT ATCAGAAGAA GTCAAAGACA CATCGCGCGT TTGTGAGATG TATTCATTCG 
GGGTGACAGT ATGGGAGTGT GTGACGAGCA AAATTCCACA TGGAGGGAAA AAGGAATCAT 
CTATAGCGCT TTTGGCTGCA ACTAAGAAGT ACCTCCCCAT GCTTGCGGCG CCCTCCAGCC 
CCCCAAAGGA TCTTTCAGAG ACAGAATCAG CTTCCTGGAA AGCGCTGAAT ATGGTTGCAG 
CATCGTGTCT CTCTCGCGAC CGCTCAGTGA GACCCACTGC TTCGATAGTT GTTGCGCTCT 
GGCACAAAGT CAAGTCTCCG GAAGTGGAAG TACCTTATTC TTTTTTTCAA GACTCGTCTT 
TTACCAAAAT GGGCGATATT ACCGAAAGTC GAGTAACGGC CGGTCCGACG ACTCAGGGAA 
CAGCAAAAGA CGACCTTGTC ATGGATGTTC CGGACGACAG AGAAAAGTCT AAATGCGGAG 
CAGCTGCGAT GTCAAAAAAT CATCGCCGCA AATTATTGGT TGTTGCACTC GTTGCTGTCT 
TGCTTACGCT TACAGTCACA GTGGTCGTTG TGCTGGTATC CAAATCGTCG CCAGATCTTG 
CATCCCCAGC ATCAGGAGTT GATGTACCAG CTGATGCGCC AGTCTCTACG TCCCCGCCAT 
CCCTACCGCC GACTGCAGTT CCGGTCTCCG TCCTCCCGCC GACTGCAGTT CCGGTCTCCG 
TCCTCCCGCC AACCGGTACG CCAATGACCG TCCAATCTCC ATCTGGGGCG TGCCTCAACG 
CCACAAGCAT AAATAGCCCA AAATGGGTTG TTTTTAACGC TTTTAAACTT TAA 

 

Protein sequence

MTDAVFFSVV ALAKAGIECC RNAQICKDEA ARIGKRLTIV VARAHEWGAV CESTRLAHFH 
EVVENVFLRL QATTSSVNRR SLWNRKFKIA LQPQTILCEI LKAESQLNTA INDLQMEQSN 
AIFSHLLDVS KGVADLLDQF GALALSKSDP SATIQRQVEK ALAETQVRAP QVAVANPDDV 
SQDGGRGQDP TLATSGMKVS HQYKTTFCPS KDDVLAISLQ PSLLKFCDDH ESLLGGGGFA 
EVFRGTYNLQ PVAIKRLKVY RGDVNSLSKL QIARDVEQLA AEALLTHKCG THSNIIHVVG 
CLSILSEVER PLLVMELMHT TLFDVIHDRV LADALAFSRR LYLLKGIAGA LEFLHLQGIV 
HHDIKSLNIL LNKKLTVAKL ADFGTTSHQG NQIAGTAAYQ APEILSEEVK DTSRVCEMYS 
FGVTVWECVT SKIPHGGKKE SSIALLAATK KYLPMLAAPS SPPKDLSETE SASWKALNMV 
AASCLSRDRS VRPTASIVVA LWHKVKSPEV EVPYSFFQDS SFTKMGDITE SRVTAGPTTQ 
GTAKDDLVMD VPDDREKSKC GAAAMSKNHR RKLLVVALVA VLLTLTVTVV VVLVSKSSPD 
LASPASGVDV PADAPVSTSP PSLPPTAVPV SVLPPTAVPV SVLPPTGTPM TVQSPSGACL 
NATSINSPKW VVFNAFKL