Gene PHATRDRAFT_38694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38694 
Symbol 
ID7203398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp707819 
End bp708865 
Gene Length1047 bp 
Protein Length348 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182588 
Protein GI219124601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCCT TCGCGGGAGG GTTCGGAAAC GACACGTCAA AACGCGCAGC CAAGCAAAAC 
AAAAATTCCA GACGTCCGAA ACGAGGATTG AGTGACTTGG CTCCTCCAGT TGCAAGTACC
GAATCCATGT CAGTCCAGCT CGATAAATGG GGGCTTCCTC CGCCAACCGC GGAAGACATT
TTCCCTGCTT TGCCTCCCGG AACTGAGCTG ATACCTGCTA GGAAATCGAG CACAGAACAC
ACTTTGACCG AAATCCGGAA GGCTCTGAAA GATCACTTCC CTCTGACGCT CGATCGTTTT
GATGACAACG GGGTAGAAAC GAGCACACTC GACGGCCGCG AACCCATGCG ATTGCGAATG
TTGCATCAGT CACCTCCAGT GATTGCTATT GATCACTTCT TAACCCCCGA TGAATGCCTA
AACGTTGAGC ACGCTGCGAT GCCGCCTTCT TCAACGCCAA AACACACAGA AGGGGAATAC
CACAACGAGG CCGTTCGGGT AAATTCGGCC ACTTTTTCGC CTTTGGCTCA GTCTAAACGC
ACTTCTACGT CCTGGTTTTG CTATTATTCT CAAGTACCAA CGTTGCTGGC GAAAGCACAT
CATGTGTTGG GCATCTTGTT CCCACAAATG GAAGAACCGC AAATTGTTCG GTACAAAACG
GGCGAGGAGT TCTCGTGGCA CTACGACGAA GTTCCAACTC AACAGCTTGG GAACGGCGGA
CAGCGACTGG CTACGCTTCT GGTATATCTT AACACAGTTG AAAGAGGCGG TGGTACAGTT
TTTAGAGACT TACGGACCCC GGACGGATCT CTTTTGACGA TGCAACCAGT ACAAGGGTCG
GCTCTTATGT TTTTTCCCGC CTATGCCGAC GGCCGACCCG ACGATCGAAC CTTACATAAG
GGCGAAATGG CCGCGGATGA GAAAAGAATA GTGCAAATGT GGATCCATGA GCGACCTTAC
ACGGCTGCCG TACCGATGGG GAACTCTCAG GAAGCTGCTA TAGAAGCAAT TGTACGAGCC
AGTCGAGATC TGTGCTACTC TCCTTAA
 
Protein sequence
MTAFAGGFGN DTSKRAAKQN KNSRRPKRGL SDLAPPVAST ESMSVQLDKW GLPPPTAEDI 
FPALPPGTEL IPARKSSTEH TLTEIRKALK DHFPLTLDRF DDNGVETSTL DGREPMRLRM
LHQSPPVIAI DHFLTPDECL NVEHAAMPPS STPKHTEGEY HNEAVRVNSA TFSPLAQSKR
TSTSWFCYYS QVPTLLAKAH HVLGILFPQM EEPQIVRYKT GEEFSWHYDE VPTQQLGNGG
QRLATLLVYL NTVERGGGTV FRDLRTPDGS LLTMQPVQGS ALMFFPAYAD GRPDDRTLHK
GEMAADEKRI VQMWIHERPY TAAVPMGNSQ EAAIEAIVRA SRDLCYSP