Gene PHATRDRAFT_38671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38671 
Symbol 
ID7203389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp659282 
End bp660202 
Gene Length921 bp 
Protein Length306 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182732 
Protein GI219124901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.292382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA AGATAAACTC GAGCAGGGGT TCGTACGAAG TGTTCAATGC TGTCGATGAG 
TTGGTTGCCA AGCCTGTTCT GGGAAGTGAC GGGGCAGCCG CCTGGCAATC TTTTCGCAAC
GACAAATCCG TCCTGAAGCA TGCGTATCGG TCCACGCCTT CGGTGGCACC AACGGCCCCC
CTGAAAGCTG CGGACCGAGC ATCAGGGATG AAGTCGTGGC AAGACGAACG CAAGGTCGAG
GCAAAGACGC GGCAAGAGAC TGGAGCGGCC GAGATCAACG CGGGCTACAC AAACTTTCAG
CGCAAAGGAG GTGACGAAGA AGCAATCTCG CGAAAGAAAC GGAAGCAAAT TGAGTCCAGG
ATACGTCCAG AGGATGTCCC GTATTGTCTT CCAGCCCCAA CCTTTCAAGG TTGGAAGTTT
GATTACGTGT TTACCACCAG AGATCGAAAA AGTGGCTACT ACTGGGATGG AACGGATTCT
GTCAAACAGC TTCGTGGCGA CGTTCTTCCA GAGATAGCTC CAAGGATAGT AGAGGATTTC
GAGAATCCCA CTCCCACTGA CGAATTAGAA GGACTTGCCA AGGAGCGGAA GAAAAGGAAG
AAGCAAGGAC CGGTTTTTGT TCACGATCCG AACCATCCAT TGGAACAAGT CTCCGCCGCT
TTACGGCGTT CGCATCCCGC GCTTCCGTTA GGATGGGAGG CTGCGAAAGA TCGTGCGACG
GGGAAGACGT ATTACTTTAA TCGAACAACG TCACAACGTC AGTGGGAACC GCCTCCGGCA
TTACTAGGCA AATTTACCGA GGAGGGTACG GATACTCCAA AGCTCGTTGC TGGATGGGAC
ACTGCAGTAG ATTCGGCATC AGGAAAGACG TACTATTACA ATGTGGTAAC AAACGAGACA
AAATGGGACC GACCAACTTA A
 
Protein sequence
MSEKINSSRG SYEVFNAVDE LVAKPVLGSD GAAAWQSFRN DKSVLKHAYR STPSVAPTAP 
LKAADRASGM KSWQDERKVE AKTRQETGAA EINAGYTNFQ RKGGDEEAIS RKKRKQIESR
IRPEDVPYCL PAPTFQGWKF DYVFTTRDRK SGYYWDGTDS VKQLRGDVLP EIAPRIVEDF
ENPTPTDELE GLAKERKKRK KQGPVFVHDP NHPLEQVSAA LRRSHPALPL GWEAAKDRAT
GKTYYFNRTT SQRQWEPPPA LLGKFTEEGT DTPKLVAGWD TAVDSASGKT YYYNVVTNET
KWDRPT