Gene PHATRDRAFT_38526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38526 
Symbol 
ID7203290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp317076 
End bp318047 
Gene Length972 bp 
Protein Length323 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182511 
Protein GI219124440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGA AAGTCCTATC TGTCAACTGG ATTTTCTGTT GCTGTCTCGT CGCAGCCCTG 
CAAAAGAGCA CGGATCCTCC GACTCGTCCG CAAATCGTCC AAGATGCGTT CAACAACAAC
ACCCCTCTGT ATTACTTTGG TCTAGGATCC AACATGCTGC GATCCAAGCT AGAGAATAGG
TCTTCGCAGG GTAAGATCGA GATCCTGAGT ATGGAACCCG CCGTAGTTCC ATCACATCGG
CTCGCCTTTA ATCTTCGCGG CTTTCCTCCA CTGGAACCAG GCATGGGGAG TTTGGAACCG
GTAAACGCTA CAAGCCGTGC TCTCATGGCA TACAACAAAC CGGAATGTCA CGGCGCACTC
GTACAGCTCG TGCCAGAAAT GTACGAGCGC GTTATGAAGT CCGAAGGCGT CGGTATGAAT
CAATCGGGCT ACGAAGAAAT CGTCGTCACA GCCGTTCCCT ACGATCCCCG CAAACCACCC
GTACAAGCCA TCGCCCTGCG TGCCAAACCC CACGTTCGAC TACGCCGGGA TCCCAGCCCG
TCCGCACGAT ATATGGACAT TTTGCGCCAA GGTGCCGCCG AACTGCAGCT CAAGCCTTGC
TACCAAGAAT TCTTGGCGCA GCATCCGGTA CAAATACTCC CGACGTGGTT GCGTCGTCTT
TCTATATACA ACCTCATATT TACCTTCTCA CTCTCGAACA AACTCAAGTG GCGAGGTGTG
AGTAAAATGC AGAGCTGGCT ACTCTTTCGA GTCTACGTCC CATCCAACGC CTCCTGGATT
TGTAGACACG GTTGTTCGGT TTGTACCGCA GGCATTCTCT TGCCGGGAGC GATTCTGGGA
TCCGCCATCA AAATGGTGGT CTCAAAATGG GGTGGCGACT TTCCGCCGTT CCTGAAGCGC
ATGATGGATC TTTTGGACGA TCCATTGGTG GCTGCACCTA AAGCCAACGC TGAAACTGTG
GAACCTAAAT AG
 
Protein sequence
MKLKVLSVNW IFCCCLVAAL QKSTDPPTRP QIVQDAFNNN TPLYYFGLGS NMLRSKLENR 
SSQGKIEILS MEPAVVPSHR LAFNLRGFPP LEPGMGSLEP VNATSRALMA YNKPECHGAL
VQLVPEMYER VMKSEGVGMN QSGYEEIVVT AVPYDPRKPP VQAIALRAKP HVRLRRDPSP
SARYMDILRQ GAAELQLKPC YQEFLAQHPV QILPTWLRRL SIYNLIFTFS LSNKLKWRGV
SKMQSWLLFR VYVPSNASWI CRHGCSVCTA GILLPGAILG SAIKMVVSKW GGDFPPFLKR
MMDLLDDPLV AAPKANAETV EPK