Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38409 |
Symbol | |
ID | 7203439 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 25255 |
End bp | 26621 |
Gene Length | 1367 bp |
Protein Length | 440 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182598 |
Protein GI | 219124622 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.377002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAAA ACGGACCCAT CATCCTCATC ATGAACCAGT ATGCATATCT GGGAAAGGGT AGAACTATTC ATTCTAGTGC CCAGCTCGAG CACTACCACA ACCATGTTGA GGATCGCGCT TGTACCGTGG GCGGAAACCA ACGTATCGTC ACATTAGACG ATTACATTAT CCCGCTGCAT ATCAGGCAAG GCCTTCCTTA TATGGATATG CGCTATCCCA CCAATGAAGA GTTCGAGTCA CTATCCCATG TTGTCATCAC CTCCGATGTA GATTGGGATC CATCCGTCTT AGACAACGAA ATTGACCTCT CTGTGGAATG GTCCAGCAAC TTTCTTGATA TACCTGGTCA CCCCTATGTT GAACCACGCT TCGATAACAA CGGCCAATAT CTTCACCGCC ACGTCGCCTC GTGTTCATCC CTTCGTGAAG GTGCACTCGA CCGTTTAATA CAGTGTAAAC AGCATAATAT TGCACGCAAC GAGCATGACT ATGAAGCGCT TCGTCCATGT TTCGGATGGA TTTCGGCTGA CACCGTCCGA AAAACTCTCA TGGCCACAAC CCAGTACGCA CGAGAAGTAC ACAACGCCCC GTTGCGGAAG CATTACAAGT CCCGTTTCCC AGCCTTAAAT GTACACCGGC GAAATGAATC CGTTGCCACT GACACCATAT GGTCTGATAC CCCTGCCGTT GACAATGGTG CTAAATTCGC TCAACTCTTT GTTGGACGTC GTTCCCTCGT TACGGACGTC TATCCTATGA AAACGGATAA AGAGTTTGTC AATGCACTTG AAGACCACAT TCGTTATCGT GGTGCCATGG ACAAACTGAT CAGTGACCGT GCACAGGTTG AAATCAGTAA GAAGGTCACC GATATTAGAC GCGCCTATAA TATCGATCAG TGGCAGAGTG AGCCTAACCA TCAGCACCAA AATTTCGCTG AACGCCGTAT TGCAACCATC GAAGCCAATA CTAATAATAT TCTCAACCAC ACTGGTGCCC CTGATTTCAC GTGGCTACTT TGCGTCTCCT ACGTTTGCTA TGTGTTCAAC CATTTGGCAC ACGAATCTTT GAACAACCGC ACACCCCTAG AAGTTCTTAC TGGTTCTACC CCTGATATCA GTGTTCTTTT ACAGTTCCAC TTTTGGGAAC CGGTTTATTA TCGCCTTGAC GATGCGACAT TCCCTTCAGA TGGTACTGAA CAACGAGGAC GTTTTGTGGG CATCGCGGAT TCCGTCGGGG ACGCACTTAT TTATAAGATC CTCAACGACG GCACCAACAA AATTCTATAC CGATCTAGCG TTCGTTCTGC CAACATCCCA GGAGCAACCA ACCTACGCCT TACACAGGAT GGGGAGAGTG GTCCTAA
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Protein sequence | MSQNGPIILI MNQYAYLGKG RTIHSSAQLE HYHNHVEDRA CTVGGNQRIV TLDDYIIPLH IRQGLPYMDM RYPTNEEFES LSHVVITSDV DWDPSVLDNE IDLSVEWSSN FLDIPGHPYV EPRFDNNGQY LHRHVASCSS LREGALDRLI QCKQHNIARN EHDYEALRPC FGWISADTVR KTLMATTQYA REVHNAPLRK HYKSRFPALN VHRRNESVAT DTIWSDTPAV DNGAKFAQLF VGRRSLVTDV YPMKTDKEFV NALEDHIRYR GAMDKLISDR AQVEISKKVT DIRRAYNIDQ WQSEPNHQHQ NFAERRIATI EANTNNILNH TGAPDFTWLL CVSYVCYVFN HLAHESLNNR TPLEVLTGST PDISVLLQFH FWEPVYYRLD DATFPSDGTE QRGRFVGIAD SVGDALIYKI LNDGTNKILY RSSVRWGEWS
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