Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22145 |
Symbol | |
ID | 7203441 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 57304 |
End bp | 59157 |
Gene Length | 1854 bp |
Protein Length | 585 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182603 |
Protein GI | 219124632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.183468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTCGTACGC TCATGCCCAT TGACTACTAC CGCCTGAACT TTTGCTTACC AGAGGCAGGA GCCAAAATGG ACGATGAGAA TCTAGGAGAG TTCCTTTCGG GAGATCGCAT TCAGTCCTCG CCGTACGTTC TCCAAATGAA GAACGACATG TTCTGTGAAC AGCTCTGTAT GGCCGACCTT GGACGGGGCG AACAACCCGG CGTACAGCCC AACAAGTTCG TCAAGGCCAT TCGCAAAAAC TACCATAATA ACTGGATCGT CGACAACCTC AGTTCCGCCA GTAAAGTTTA AAACGATAAA GAAGTGACTA CGAGATACTG GAAGGGCTTT CCTGTTGGCT TTATTGGCAA AGATGGCCAT GTCTATGTGA ACAACCACGT CAATATTGAA ATCATGTACC ATCCATCGGA TACGGAAACG GACAAATACC ACATTGTGCG ATTCATAGTG GAGCCCTTTT CCATCAAGCA TGATTTCTAT CCGCTTATGG ACGATACAAA CGACATTGAT GACACCCACG TTCTAATGCA GGTCGCCAAG ATCAACAATC CCATTGAGTC CTGTGCCCCC AAAGCAAAGA TCCACACCAC CTACAATATG ATTACCCAGT CGGGTCGGGA ACCCCAACGC GCTTCTGGTC AAGTCCTATT TACCTACGAT GTGAAATGGG AACTCAATGC GGAGGTCAAA TGGGCATCGC GTTGGGATAT TTACCTAAAC ACGGACAATG GCATTAACGC CAAAGTGCAT TGGCTGAGTA TTGCAAACTC TCTTGTCATT GTCTTTGTGC TCAGCGCCAT GATTGCTGCT ATTTTGATCC ACAACGTGCC ACGGGACATT TCTCGGTACA ATCGTCTCGC TACGGACGAA GAGACAGCGG AGGGTTTGAA AGAATACGGC TGGAAGTTTG TGCACGCCGA TGTTTTTCGG CCACCGACAT TCTCGCCGCT GTTATTGGCG GTTGCTTGCG GTACCGGAGC CCAACTGCTC GCTATGACCT TTTGGACGAT TGCATTTTCT GCAATGGGAT TTATTAGCCC CGAGAGACGC GGATACCTAC TCATGGCGGA ATTGCTGTTG TTCGTCTGCA TGGGTGGTTT GGCGGGATAC GTTACGGCTC GCTTTTACAA AACCTTCAAG GGCAAGTCCA GGCAAAAGGC GACGACACTC ACGGCCGTGG GCTTTCCCGG AATCTGCTTT GGTGTATTCA TAATCATGAA TATAATTGCT CTCGTGAAGC AGTCTACCTA CGTTGTGCCC TTTGTGACTA TGTTGAGTCT CGTGGTTTTG TGGTTTGGAA TTTCTATACC GCTTGTCTTC TTCGGCGCCT ACTTTGGTTA CAGACACGAG GCTATTGAGT TTCCCGTCAC TACCAGCTCG ATCCCCCGGC AGATTCCCAA TCAACCTTGG TTTATGGGTA TTCCGTTTAC CATGGTGATT GCTGGTATCT TACCATTTGG TTCGTGCTTT GTCGAGCTCT ACTACATTCT TGCCTCCGTG TGGATGGACT ACTACAACTA CGTCTTTGGC TTTCTGTTCC TGGTCTTCGT GATCCTCATC ATTACCTGCG CCGAAATTAC TCTTCTCTTT ACCTACTTCC AGCTCCGTAG TGAAGATTAC CACTGCTGGT GGCGCTCGTT CGCAAATGCC GGATCGACTT CGGTGTACGT CTTTTTGTAT TCCATCTTAT TCTTCCAGCA GCTTGAGGCC AACTTGTTGG CAAGTTACTT CCTTTACTTT GGTTACATTG GACTGTCCTG TTTGGGACTG TTCTGCATGA TGGGTTTTGT GGGAATGTCA ACCTCATTGT GGTTCAACAA GGTCATTTTT CGTCCATCAA AATCAAATTA GATC
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Protein sequence | MPIDYYRLNF CLPEAGAKMD DENLGEFLSG DRIQSSPYVL QMKNDMFCEQ LCMADLGRGE QPGVQPNKFV KAIRKNYHNN WIVDNLSSAK VTTRYWKGFP VGFIGKDGHV YVNNHVNIEI MYHPSDTETD KYHIVRFIVE PFSIKHDFYP LMDDTNDIDD THIHTTYNMI TQSGREPQRA SGQVLFTYDV KWELNAEVKW ASRWDIYLNT DNGINAKVHW LSIANSLVIV FVLSAMIAAI LIHNVPRDIS RYNRLATDEE TAEGLKEYGW KFVHADVFRP PTFSPLLLAV ACGTGAQLLA MTFWTIAFSA MGFISPERRG YLLMAELLLF VCMGGLAGYV TARFYKTFKG KSRQKATTLT AVGFPGICFG VFIIMNIIAL VKQSTYVVPF VTMLSLVVLW FGISIPLVFF GAYFGYRHEA IEFPVTTSSI PRQIPNQPWF MGIPFTMVIA GILPFGSCFV ELYYILASVW MDYYNYVFGF LFLVFVILII TCAEITLLFT YFQLRSEDYH CWWRSFANAG STSVYVFLYS ILFFQQLEAN LLASYFLYFG YIGLSCLGLF CMMGFVGMST SLWFNKVIFR PSKSN
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