Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_1484 |
Symbol | |
ID | 7203372 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 693375 |
End bp | 694886 |
Gene Length | 1512 bp |
Protein Length | 422 aa |
Translation table | |
GC content | 59% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182742 |
Protein GI | 219124922 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.579641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACGA CGACTGCTAC TGCTACTGCT ACCCACCCGA CACCGGTCGC CGACGCCATT GTCCAAAACT TGCATCGCGC GTTCTCACCG CTGTCGCATT TGGAAATCCG GAACGAATCG CACCGACACA ACGTTCCACC CCATTCGGAA ACGCACTTTC AAGTCGTCGT CGTTGCCGAA CGTTTCAACG ACGTCCCGTC ACTCGTACAG CGACACCGAC TGGTCAACGA AGCACTCGCC CCGCAACTCG CCGGACCGGT CCACGCTCTT TCCATCGTTG CCAAAACACC GGCCCAGTGG CAAGCCATGG GGGAACAGGG ACAGGCTGTT CCCGCCACTC CCAAGTGTCG GGGTGGGGAT GGAACTTTTG CCACCCGAAC GTAG
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Protein sequence | MRNRRAQELL ELITQLGPTA IKVGQALSVR PDLIAPEYAS ALATLQDRVP PFDCTRAQVL LREQLGTERY GHLKGIGLEK NKPPVASASI GQVYRGFIDD KEVAIKVQRP NVLADIALDL HIVREFSPLY QKVTKTSSDL QSLANEWGRG FIAELDYREE ALNTIRFNQE MQKRNLNAVC SPVVVSDYST EQVLVTEWVD GTRLDESDAD DVPRLCSVAL NAYLVMLLEL QSLHCDPHPG NLLRTRDGRL CILDWGMTLD IDPDLQYSLL EYVAHLTSED YDKLPEDLAK LGFLKPDKLE FARRSGVLEP LKYFLKQAGQ GGGAKGVRER IFEDYRSKYP ELQNQNRDSF QIPEWFLYTS RAFLTLEGVS LQADESFSII KGCFPYVAKR LVADEDPRAR KALRDLIYGA SDAVDVDRLS DL
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