Gene PHATRDRAFT_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_1484 
Symbol 
ID7203372 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp693375 
End bp694886 
Gene Length1512 bp 
Protein Length422 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182742 
Protein GI219124922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.579641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGA CGACTGCTAC TGCTACTGCT ACCCACCCGA CACCGGTCGC CGACGCCATT 
GTCCAAAACT TGCATCGCGC GTTCTCACCG CTGTCGCATT TGGAAATCCG GAACGAATCG
CACCGACACA ACGTTCCACC CCATTCGGAA ACGCACTTTC AAGTCGTCGT CGTTGCCGAA
CGTTTCAACG ACGTCCCGTC ACTCGTACAG CGACACCGAC TGGTCAACGA AGCACTCGCC
CCGCAACTCG CCGGACCGGT CCACGCTCTT TCCATCGTTG CCAAAACACC GGCCCAGTGG
CAAGCCATGG GGGAACAGGG ACAGGCTGTT CCCGCCACTC CCAAGTGTCG GGGTGGGGAT
GGAACTTTTG CCACCCGAAC GTAG
 
Protein sequence
MRNRRAQELL ELITQLGPTA IKVGQALSVR PDLIAPEYAS ALATLQDRVP PFDCTRAQVL 
LREQLGTERY GHLKGIGLEK NKPPVASASI GQVYRGFIDD KEVAIKVQRP NVLADIALDL
HIVREFSPLY QKVTKTSSDL QSLANEWGRG FIAELDYREE ALNTIRFNQE MQKRNLNAVC
SPVVVSDYST EQVLVTEWVD GTRLDESDAD DVPRLCSVAL NAYLVMLLEL QSLHCDPHPG
NLLRTRDGRL CILDWGMTLD IDPDLQYSLL EYVAHLTSED YDKLPEDLAK LGFLKPDKLE
FARRSGVLEP LKYFLKQAGQ GGGAKGVRER IFEDYRSKYP ELQNQNRDSF QIPEWFLYTS
RAFLTLEGVS LQADESFSII KGCFPYVAKR LVADEDPRAR KALRDLIYGA SDAVDVDRLS
DL