Gene PHATRDRAFT_14778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14778 
Symbol 
ID7203275 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp236263 
End bp237887 
Gene Length1625 bp 
Protein Length515 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182494 
Protein GI219124404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0096196 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCAAACTTC TGGACAACGT TTGGGGGGAA GTTCCCCCGA AACAGACAAC GGCTGTGATG 
GGTCCTTCTG GAGCTGGAAA GACATCATTA CTCAATATCC TTGCTGGTCG CGCTCGCACT
CATGGTCAAA TTTCTATCGG AAAAGATATT CGTCTCAACA ACTACAGTGT GGACCCCACA
AAAATGAAGG TTCGTCAAAT GATTGCATTT GTCGCTCAAG ATGATAGCTT GCAGGAGACA
GCTACACCTC GCGAAGCAAT TCGTTTTTCA GCCAAGCTAA GGCTGCCTCG AGCTACCACA
GAATCTCAAT TGGATAAGCT GACGATCCGA ATGCTGAGTG AACTTGGTTT GACGGCTTGC
GCCGATGCAA TGATTGGAGG TAGACTACTA AAGGGTGTTT CAGGCGGTGA ACGCAAGCGA
ACTTCGGTTG GTGTGGAACT TGTGGTCAAG CCAGCGCTAG TCTTTCTGGA CGAACCAACG
AGTGGATTGG ACTCATTCAG CGCGGTGCAG CTCTGTCAGG TCTTGAAGAA AGTAGCGAAT
GCTGGAGCCA GCGTGCTGTT TACAATCCAC CAGCCGTCAT CTGTCATCTT CAGTTCCTTT
GATCATTTGC TAGTGATGAA CAAAGGCCGT CTCATGTACA CTGGGTCGGT CCAGGATGTT
CCGTCCTATT TCGCGAATCG TGGTCATCCC AACCCGCCAA ACTACAATCC TGCTGACTTC
ATTATGGATG TGGCGCAGTC AATTCCCGTG GAGCAGCTCA CTAGAGAGGG CTTTTTTCCT
GCTGATGAAC GCAAAATGGC TGATCCGTTT GAACCAGAAG AAGGACAGGA TGCGCTCGGG
ATAACTGTGA CCCGACACAC ATATCGAGGT GTGGACATGT ACGACGGTTC ACCACCAGGG
CTTCTGACTG AGATCAGACT GCTTTTCCAG AGGGAGGTAA ACAATCTCAA ACGTGATACA
TCAGCTCTGA AAGCGCGCTT TAGCCTTAGT CTCGTTGTTG GGCTAATTGT GGGAGTGATC
TTTTGGAAGG TTGGCGAGAC GGATAGTTCC GTTTCTACAA ACCTGCAATC TCACTTCGGT
GCAGTCATTC TTGTTTCTTT AATGAGCATG TTCGAAACCG CACAGCCCGC ATTATTCGCA
TTTCCTGCCG AGCGCCCTGT CTTTCTCCGT GAATACAGCA CGAATCACTA TTCGGCAGCT
TCTTACTTTC TGTCTCGTCT GACTGTTGAG GCTTTTATTA CCGGTCTGCA GGCTATGTTT
ATCGTGAGTA TCCTTTGTTG GTAGATTTTA TTGGAGATTC CGTATTGGCT CATCAAATCT
CACTACTTTT TCTTCCGGAG CAGTGTATTA TCACATACTT CATGATTGAC TTCCAATTGA
ACTTTGGTAT GCTTTTTGCC GTTCTATACG TATTGGCCAT GGCCAGCACG GCACTGGCTG
TTCTTTTGGG ATGTTCTGTG GAAGACCCGA AAGTAGCACA GGAAATGCTT TCCATCATCT
TTGTTCCTCA GATGCTATTT TCCGGATTCT TTGTGACCAT CGAACTCATT CCAGCTTGGT
TGCGTTGGCT CCGGTACATT TTCCCGTTGA CATACGCTAT CCGTATTATC TTGGTGGAAG
AATTT
 
Protein sequence
RKLLDNVWGE VPPKQTTAVM GPSGAGKTSL LNILAGRART HGQISIGKDI RLNNYSVDPT 
KMKVRQMIAF VAQDDSLQET ATPREAIRFS AKLRLPRATT ESQLDKLTIR MLSELGLTAC
ADAMIGGRLL KGVSGGERKR TSVGVELVVK PALVFLDEPT SGLDSFSAVQ LCQVLKKVAN
AGASVLFTIH QPSSVIFSSF DHLLVMNKGR LMYTGSVQDV PSYFANRGHP NPPNYNPADF
IMDVAQSIPV EQLTREGFFP ADERKMADPF EPEEGQDALG ITVTRHTYRG VDMYDGSPPG
LLTEIRLLFQ REVNNLKRDT SALKARFSLS LVVGLIVGVI FWKVGETDSS VSTNLQSHFG
AVILVSLMSM FETAQPALFA FPAERPVFLR EYSTNHYSAA SYFLSHSVLA HQISLLFLPE
QCIITYFMID FQLNFGMLFA VLYVLAMAST ALAVLLGCSV EDPKVAQEML SIIFVPQMLF
SGFFVTIELI PAWLRWLRYI FPLTYAIRII LVEEF