Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_14771 |
Symbol | |
ID | 7203540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011684 |
Strand | - |
Start bp | 591224 |
End bp | 592078 |
Gene Length | 855 bp |
Protein Length | 285 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182718 |
Protein GI | 219124872 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.229039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACTTGC CAACTATTTG CGTCATGGGC GACACCTCCA GCGGTAAGAG CTCACTGTTA AGCAACCTAT CGCTGGTGGA GCTGCCGTCT TCGCACAAGA TGACCACACG GTGCCCAATC ATGATCCACA TGAAACGTTC GGGGACGACG CTAGCTCGAG TCACGGTCCA GTGGCGTTCC CACGAGACGG AACGACCGGA CTTTGGCGAA CGCATTCTTT CCGAAAGCCT CTGGGAGAAG ATTCCTGGTA TCATCTTGGA AGCGCAGCAA TTCGTTTTGA CTCACACCGG CAAGGAGGTG GCGCCCGACG TGGTTTCTCT CCAAATTCAG GCACCCAATA TGCAAGACCT GACGCTCATC GATTTACCGG GGACGGTTCG TTCGAAAGCT CGGGACGAAA GTGAAACATT GGTGGAAGAC GTCGAAGCTT TAATGGACGA TTACTTGCGG AACAGCCGTT GCGTGATTCT AGCCGTGGTA CCAGCAAACG TAGACTTTCA CAATTCCCAA ATTATGGCCG ACGCCATGCA GGTTGATCCA CAGACCATTC GAACCATCCC CGTCATCACC AAACCTGACT TGATCGACGA AGGTGCCGAG AGTGACGTCG TCGACCTTTT GCTAGGGAAG AAAATGACAT TCAGCCTCGG GTTTCATATG GTGAAAGGGC GGGGACAGGC TGCACTCGAT CGAAGCGAGA CACTCGAACA GGGTCTGGCG GAAGAGCAAT GTTACTTTGA TACGAATGAT CCGTGGAAAA GTGTGACGGA TCGGAGCGTC TTTGGGACGC ATCGACTGCG GGCCAAACTA GGGGACTTGC AAATGGCCAT GATCCGGCAG TCTGTGCCGA GTATA
|
Protein sequence | MDLPTICVMG DTSSGKSSLL SNLSLVELPS SHKMTTRCPI MIHMKRSGTT LARVTVQWRS HETERPDFGE RILSESLWEK IPGIILEAQQ FVLTHTGKEV APDVVSLQIQ APNMQDLTLI DLPGTVRSKA RDESETLVED VEALMDDYLR NSRCVILAVV PANVDFHNSQ IMADAMQVDP QTIRTIPVIT KPDLIDEGAE SDVVDLLLGK KMTFSLGFHM VKGRGQAALD RSETLEQGLA EEQCYFDTND PWKSVTDRSV FGTHRLRAKL GDLQMAMIRQ SVPSI
|
| |