Gene PHATRDRAFT_14762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14762 
Symbol 
ID7203279 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp255704 
End bp256867 
Gene Length1164 bp 
Protein Length357 aa 
Translation table 
GC content52% 
IMG OID 
Productisocitrate dehydrogenase 
Protein accessionXP_002182499 
Protein GI219124414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGTG TCGAGAATAA AGTCGTGGCC CCGCCCATGG TGTACATTGC CGGCGAAGAA 
ATGACCCGCT ACGCCTGCGA TCTCGTCGTC AAATCATGGC TAGAGCCGTA CTTTGATCTT
TCCCAATGGG AATATTTCGA TCTTTCTTGC GTCAATCGCG ACAACACCAA CGACCAAGTC
CTCCGGGACG CCGTCACGGC GGGACAACGC ATCGGGGCCA TCTTCAAGGA ACCCACCATT
ACTCCCAGTG CTATTCAAAA GAAAGCCTTT GGGTTGAAAA ACAGTTTGGG CAGTCCCAAT
GGTGCCATGC GGGCGGGTTG GAATGGCATT ACCATTTCGC GTGATACCAT TCATATTGAC
GGCATTGAAC TGGGTTACAA GCGACCCGTC TTTTTTGAAC GACACGCCGT CGGAGGGGAA
TATGGAGCCG GATGGAGCAA GGTCGGGCGA GGCACGCTGT TGACGACCTA TTTGCCGTCG
GATGGGAGGG ATCCCTTTGT CGTTGACAAA CGTGATTTGA CCGATCAGCA TAATGTGGTC
GTCACCTACC ACAATCCCTA CGATAACGTT GAACCCCTCG CGCACTTGTT CTTTCAGCGA
TGTCTCGACG CCAACATTAC ACCCTACGTG GTGACCAAAA AGACCGTCTT TAAATGGCAG
GAAGGATTCT GGGCAGTCAT GAAAGACGTT TTCGATGAGC ATTACAAGTC TCGATTTGAG
GAGAAGGGCC TTTTGCAAGC CTGTGGCGGA GATTTGCAGC ATTTGATTTC CGATGCTGCA
ACGATGCAGC TCATTCGTTG GACCGACGGC GGCTTCGGTA TGGCGGCTCA TAACTATGAC
GGTGATATGC GTACGTGATG ACCCAACATA GGGACAGGAC GTTTCAAATG ACGCTTAATC
GCTTTCCTGA CTACCGTCTC ACCTTGTTTG CTTTGCATTG CAGTGACGGA TCAGATTGCC
CAAGTCCACC GGTCGCCAGG TTTCATCACA AGCAACCTGG TCGGCAAGGC CCCTGACGGA
AGCCTCATCA AAGAGTTCGA AGCCTCCCAC GGTACCGTCA GTGATTTGTG GAACGATCAT
TTGGCCGGTA AAGAAACGTC TCTGAACCCT CTCGGTCTTG TGGAAGCTAT AGTTGGTGCA
CTCCAACACG CAGCCGTCCT TGAT
 
Protein sequence
MLSVENKVVA PPMVYIAGEE MTRYACDLVV KSWLEPYFDL SQWEYFDLSC VNRDNTNDQV 
LRDAVTAGQR IGAIFKEPTI TPSAIQKKAF GLKNSLGSPN GAMRAGWNGI TISRDTIHID
GIELGYKRPV FFERHAVGGE YGAGWSKVGR GTLLTTYLPS DGRDPFVVDK RDLTDQHNVV
VTYHNPYDNV EPLAHLFFQR CLDANITPYV VTKKTVFKWQ EGFWAVMKDV FDEHYKSRFE
EKGLLQACGG DLQHLISDAA TMQLIRWTDG GFGMAAHNYD GDMLTDQIAQ VHRSPGFITS
NLVGKAPDGS LIKEFEASHG TVSDLWNDHL AGKETSLNPL GLVEAIVGAL QHAAVLD