Gene PHATRDRAFT_54805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_54805 
Symbol 
ID7203062 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp161199 
End bp164883 
Gene Length3685 bp 
Protein Length1181 aa 
Translation table 
GC content50% 
IMG OID 
Productatpase2-p5 
Protein accessionXP_002182337 
Protein GI219124074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGTGC ACCTAAGTGT CGTTTTACTG TCGCAGTGGA ACGTAATTTT CCAGGCAACG 
ATCGGGTATC AATTGGCGGA GCGATCAAGG GATAAAATAG CGTCGTGGAC GCACGCATTG
GTACAATCTA CCCACTCTGG TCTTAGTAAT ATAGGGGATC AAGATGCCGG TATTGTCGTA
GTACAAAAAG ACGAAAATGA CATAGTTCAA ATTGTGTTCC ATGATACCAC CTTCCGATGC
CGAGTAGAAG ACGTGGACTG GGATATACTA CTCTGGCAAT CAACGGAGAT AACGGCATGT
CACGCCACGA AAACATCGCC AGTCCCCCAA TTTCGTTTGC TACGCTATCC AGTCGACTTG
CCACGGCAAT TTTACGCGTC CTGGAATGGA CACTCTAGTC TCGAACAGGT CCGAATTGCC
AGTCAAGTAT ACGGTTCCAA TCAAACGCTG TTACAATTGC CTACGTTTCA GCAGCTGCTT
GGTGAACAAC TGGTCGCACC TTTTTTCCTC TTTCAAATCT TTTGCGTTGT CCTGTGGTCG
TTGGACGAGT ATTGGTACTA CGCTATATTC ACATTGTTCG CGCTACTCAT GTTCGAATCT
ACCGTCGCCT ACAATCGGCT CCAATCCCTG CAACGACTGC ATCGAGCCGG CCACAAGGGC
GATCAGCGAA TTTGGGTACA ACGGGGCATC GCACCGACAA CGGCAGCAAC AGACAAAACC
AATTTGAGAC TGCAATGGAT GTACGTACCG ACCAAAGAAT TGGTACCGGG CGATATGGTA
TCGCTGAGTG TGGCTCAGGA CGGGACACCT ACCAACGTTC CGGCCGATTT GTTGCTGGTT
AAGGGCACTG CCGTTTGTGA CGAGGCCTTG TTGACTGGAG AATCCGTCCC TCAGCTCAAA
CAAGCATTGG ATGTGAGTAA GGGCAATTCA TCAATGCGAC TGGATCTACA AGACAATGCC
TGCAAAGAAT CGATTTTGTT CGGCGGTACC AATTTGCTGG TCGGATCATC TTCGACCGAG
GAAGCTCTAG ATGAAAAGGG TACGATTACT CCAGATAAAG GCGTCAAGTG CATTGTTCTT
CGGACTGGCT TTGAAACTGC CCAAGGTAGC CTGCTGCGGA CGATGGCGCA TTCTTCTAGA
AGTGCCGATG GTGTTCACAC CTGGGATACT TTTGTTTTTA TCTTGATGCT CATTATATGT
GCCATTGGCG CCGCGACGTG GGTGCTCAAC GAGGGATGGT ACGACGAGCG TCGCAATAGA
TTTCGCCTTG TACTGCATGT TGTAATTATC GTGACGTCAG TGGTTCCGCC CGAGCTGCCT
ATGGAGTTGT CTCTTGCTGT TACTAACAGC GTAGCGGCTT TAATACAACG CTCACAAGTC
CATTGTACGG AACTCTTTCG CATTCCGTGG GCTGGTGAAG TCGACGTTTG CTGCTTCGAC
AAAACAGGGA CGTTGACTAG CGATGAGATG CGTTTGCGAG GCGTTCGCCT TTTTGAAAGC
AATGGCAACA CCACCAAGGA TGAGGAAACT GGATTGGTGC ATCCGGATGA TACTGACCTG
CCGTGGCCAG TGACGCGAGT CATGGCTGCT TGTCACTCTC TGGCACTGGC CGGATTTCAA
CGAGGAAACA AGCTGCCACG TGTGGTTGGT GATCCTCTGG AACAAGCTGT GCTGTCTCAC
ACGGGATATC GTCTGGTAGG GAACAATGTC ATTACGCATG TTGATCCTAC GAGCTCACCA
ATCATTTGCA AATCGATGAC GATCCTCCAC CGATTCTCGT TCTCTTCAAA GCTCAAGCGT
ATGACAGTTC TGGTCTCCGA AGAGGGAGGG GAAGGTGCTG TGTGGGCCCT CAGTAAGGGA
GCACCGGAGA CAATCAAACA GCTCCTATCG CCCGATGCAA TTCCATCCAA CTACGACGAA
GTTTCTTTCT ACCATATGAG TAGAGGTCGA CGTGTTCTGG CTATGGCGTA CCGAGAAGCC
GGAACCATTC ACAAGTTGCA AGCATTGAAG AACCTTGGTA GAGATAGTGT CGAACGAAGA
CTTCTCTTTG CTGGATTCTT GGTGCTCGAT TGTCCGCTAA AGCCGGATTC GAAGTCGGTT
GTGGCTGAGC TACAAGCAAG TGGGCACAAG GTCGTGATGA TTACGGGTGA CGCGATTTTG
ACTGCCGGCG AAGTTGCTAG ACAAGTGGGA ATTGTACCAG GAGAGTCCTC TAGAAAGGAA
CACTTATACC GTATAAGAGA ACGAAAAGAA AAGCCTACGC GCTCGCCCGA TGTACTCACA
GCTTTTGAAT GTGTAGCCCT AAGAGAGAAG GATGGCGATT TCCATCCAAT TATTTTGTCG
AAGGAAAAGA CTAGAACTTT TGCCGAAAAA AGTAAGCTGA ATGGCGCTTC TTTTTGTATT
TCGGGGGATG TTCTGACCAA GATCGCCGAG GCGGCGCTGC AGTCAGAAGG CCCTCCAAAT
TTATCAAACA GTTCGACGGC CGATGAAAAA CAAATTCTTC TTCACCCCGT AGCACAAGCC
GTATTGAAGG ATCTAGTGCC GTTGATTTCT GTGTTTGCCC GACACGCGCC GCACCAAAAG
GAAGCCGTTG TTGCGGCTTT CAATCACGGT GGCTACCACA CACTCATGTG CGGGGACGGG
ACGAACGATG TTGGTGCTCT GAAACGCGCT CACGTGGGCA TTTCCATCAT CAGTGCGCCT
GAAGTGGAGG CCAAGCAGCG TAAGGCGGCT AAAAAAATGT CCAAACTGAA AAAGAGTGCA
AAAAGGAACG GTACTGCAAC TCGAGCACGT CCGACAAACA ATGCCTGGGA GGAATCGTTG
CATCAATTGC AGGAAGCCCA AGAGGAACTC GACAACGTCG AGCTTGGTGA TGCGTCAGTT
GCAGCACCCT TTACTTCCCG TGCCGTAAGT ATAAAGTGCT GCAAGGATGT CATTCAACAA
GGGCGTTGTA CTTTGGTGAC CATGCTACAG ATTTACAAAA TTCTGGGTGT GAATTGCTTG
GTGAACGCCA TGGTACTGAG CAAGCTGTTC CTACACGGCG TCAAACAAGG CGATCGGCAG
TTGACAGTCC TGGGGTTGGG CGTGGCGGCA CTCTTTTTCT TCGTTACGCG CGCCGAGCCG
CTACCAACGC TGTCCCACAC CCGCCCTCCC GTGTCGGTCT TGTCCAGGCA AGCACTCTTG
TCAATTGGGT TGCAGTTTGC CGTACACATT GTCGCAATCC TGTTGGCCAC GGAAACGTCG
TTACGATTGG TGGATCCGTA CGATCCTTCG CTCGTCCCCG ATGGTCCATT CAACCCTAAC
GTACTCAATA CGTGCACCTT TCTATTGACG TGCGTGTCAA CAATCAACAC ATTCGCCGTC
AACTACCGTG GTCGTCCGTT TATGCAAGAT TTGCGGGAGA ACCGAATGTT GTACCGTTCG
CTGCAGCTTA GTTACTTGAT ACTAGCTTTG AGCGTATGGG AAGTGTTTCC ACCCTTGAAT
GATTTATTGC AGTTGACGGC GTTACCCAAC GTGACTGAAT TGTTAACCCT GCAGGAGGGT
GGCAGCAATA GTGTCGGGGT GCCGTTGCCG TGGATGCCAC TGATCCAAAC GGTAGGATTT
CCGGCATTCC TTAGTGGTCT CATGGTCGTT GATACGGTAC TAGCCTTTCA AGTGGAATCC
ATGGTACTCC GCTACGTTCC GGATT
 
Protein sequence
MLVHLSVVLL SQWNVIFQAT IGYQLAERSR DKIASWTHAL VQSTHSGLSN IGDQDAGIVV 
VQKDENDIVQ IVFHDTTFRC RVEDVDWDIL LWQSTEITAC HATKTSPVPQ FRLLRYPVDL
PRQFYASWNG HSSLEQVRIA SQVYGSNQTL LQLPTFQQLL GEQLVAPFFL FQIFCVVLWS
LDEYWYYAIF TLFALLMFES TVAYNRLQSL QRLHRAGHKG DQRIWVQRGI APTTAATDKT
NLRLQWMYVP TKELVPGDMV SLSVAQDGTP TNVPADLLLV KGTAVCDEAL LTGESVPQLK
QALDVSKGNS SMRLDLQDNA CKESILFGGT NLLVGSSSTE EALDEKGTIT PDKGVKCIVL
RTGFETAQGS LLRTMAHSSR SADGVHTWDT FVFILMLIIC AIGAATWVLN EGWYDERRNR
FRLVLHVVII VTSVVPPELP MELSLAVTNS VAALIQRSQV HCTELFRIPW AGEVDVCCFD
KTGTLTSDEM RLRGVRLFES NGNTTKDEET GLVHPDDTDL PWPVTRVMAA CHSLALAGFQ
RGNKLPRVVG DPLEQAVLSH TGYRLVGNNV ITHVDPTSSP IICKSMTILH RFSFSSKLKR
MTVLVSEEGG EGAVWALSKG APETIKQLLS PDAIPSNYDE VSFYHMSRGR RVLAMAYREA
GTIHKLQALK NLGRDSVERR LLFAGFLVLD CPLKPDSKSV VAELQASGHK VVMITGDAIL
TAGEVARQVG IVPGESSRKE HLYRIRERKE KPTRSPDVLT AFECVALREK DGDFHPIILS
KEKTRTFAEK TQAVLKDLVP LISVFARHAP HQKEAVVAAF NHGGYHTLMC GDGTNDVGAL
KRAHVGISII SAPEVEAKQR KAAKKMSKLK KSAKRNGTAT RARPTNNAWE ESLHQLQEAQ
EELDNVELGD ASVAAPFTSR AVSIKCCKDV IQQGRCTLVT MLQIYKILGV NCLVNAMVLS
KLFLHGVKQG DRQLTVLGLG VAALFFFVTR AEPLPTLSHT RPPVSVLSRQ ALLSIGLQFA
VHIVAILLAT ETSLRLVDPY DPSLVPDGPF NPNVLNTCTF LLTCVSTINT FAVNYRGRPF
MQDLRENRML YRSLQLSYLI LALSVWEVFP PLNDLLQLTA LPNVTELLTL QEGGSNSVGV
PLPWMPLIQT VGFPAFLSGL MVVDTVLAFQ VESMVLRYVP D