Gene PHATRDRAFT_48044 details

Gene Information

• Locus tag: PHATRDRAFT_48044
• ID: 7203031
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: -
• Start bp: 809463
• End bp: 811515
• Gene Length: 2053 bp
• Protein Length: 577 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002182460
• Protein GI: 219124331

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGGAAA CCCAGCTGAT TAAAAGATCC AACAGACGAT CTTTTTTCAA AGTTGGTGGG 
CTGCATTTTG GCATGCACGG GTTGCTAGGT TTTTCTTCAT TATCTCTGAC CATCCTCGCA 
TACTACAGCT ATCCAAGCGA ATACCCAATA TGGATTGGAT TGTCGCAAGT TGCAAATCTA 
GTAACGGTTA CCCATGCCCG AAATCTTCTC TCTCAAGTGC CGGCATCCAC ACAAATTTTT 
CCTGGTATAG TTGCCCCGCA CAAGGAAGCA TTCCAACGGA CAATCAGCGG AATGCAATAC 
CTCGTCACAC GTGTCACATG TCTGGTCTTT CGGGACCATT CCATGGATAT TGGATTCCGT 
AGTACCTTGG CACTCTTACT GTGGCGTGCT TGGCCTTTAA TTCCTTCGTA CCAAGCTGAG 
TGGCTCAATG GCAATACGTG GATTTTTGTT ATTCCAATGG CCCTCGGTGT CGCAGGAGAT 
TTGATCCAGT TCTGGAACGG TGACGTCTTT TCGTCGCGGC AAATTCTGTC AATTCAATTG 
CATGGGTTGC TTATGGCCTT TGGCTTCACA CTGGGTTTTC GAAACTATTT ACCCATGCCA 
CTTGGTAAGG TCGTTTGTTT TGTATGATCG AAAAGCATCA ACATCCTGTT ATGTTTAAAA 
GATAAGACCA ATCGCGTTCT GACTTTTTGT TGCGATTGTT GTTTTATACA GTTTATATGG 
GAGCTGCGTT CGGTGTGTGG AAGATCCTGC GTGAGGGAAT AATGACCTTT GAAAACGCGT 
CGCGCGAACG GCTCGCATCC CGGATGGAAC TGTATGCACT CCCGGAGTAA ACCGGCCAAC 
TTTTTTCGGG GGAGGTGCGA AACTGGTCCA TCCAACCGTA AACATTCGAA AAAACGTTGA 
TTTGGGATCG GTAGAAGACA CGACTCCTCT GAACGCCCCC ACACGTTTGG CAACAAACGT 
CCGTTTAATG AAGTCGTGGG CCCCGCACAC TGTCAGCAAT TTTGCAACAA GCCTGGTGTC 
CCGTGCCCCC CTTCCAGACA CTTTTTCCGA CTCAGTACAA ACGCAAAGCC ATTGCTTCAG 
AATATCAATC AGTGGTCACA GCGCCATGAG ATCCCAGATT TTGTTCATAT GCTCCATTGT 
GCTTATCAAT GCTGATGCTC TTTGTTTTTG CCAGCGTGAC CATTTTTTCA AACATGGAAA 
CGTCCTTTGC AGGAAAGAAA AAGCAGATTT CTTTCTCCCT GGGGAAGCAT TTTCGGTGTG 
CACAACAGTT TTGGATGCCA CGGTGGTTGG AATGGACACG TTCACCATCG TGTACAACGG 
CGGTAGCTCG ACCGCGACGC CTGTCGCGCA CGGTGGTCTA GTGCACGACA CCGACGTCAC 
CCGACTCGAA TACGCCAACG GGCAAGTTAT GATTACCACT ACAATCGTTG ACGAAAATTT 
TGCTTCGCAA CACTCTGAAA TTGAAATCGA CGAGATGGTC GCCGTTACCA TATTGCAAAA 
CATTGGTGAA ATCCGTCAAT CCTCACGACA CCTTATTCAC TATCACGGTT TACCGCGGAA 
GGGAGATGAC ATTCAAGCTC GACCAAATCT GAGACGGTTG CAGCCAGGCT TAATTTCCAA 
CGACTCATTG ACACCAGCAG AAAATTCGAC TCGGCTTGTG CCATCGCCTC CATCTCCTAC 
AACCAGGACC GTCTCTTACC CCGATTGGAA GATTCTGGAG TGGTTGGATG AGTTACCCAC 
AGGGATGGCC TATTTTATCT GGGTTGTCCT GGCTGCCATC GTACTGATCA CTGGCTTTTG 
CTGTGTACTA TTTTCGGTCC TTCCCCTTAT TTACCGCTTG GAATCTTTTC GAGCTCACCG 
TGCTGAACAG CTGGCGATTG CCCGAGCTTG CGCAAAGATG GATGTGTTTA CGAACGAAAA 
TCTTACACAA TGCTTTGGAA GCAACTGGTA CAACTTATAC ATTGACGGTA CGCTGCCACT 
GGAAGCGATC AAATTTGATG ACGGCCTACT GCGTGTGGAA CGAAACCGCA AGCGTTACGA 
GCGCATGATG GAG 

 

Protein sequence

MGETQLIKRS NRRSFFKVGG LHFGMHGLLG FSSLSLTILA YYSYPSEYPI WIGLSQVANL 
VTVTHARNLL SQVPASTQIF PGIVAPHKEA FQRTISGMQY LVTRVTCLVF RDHSMDIGFR 
STLALLLWRA WPLIPSYQAE WLNGNTWIFV IPMALGVAGD LIQFWNGDVF SSRQILSIQL 
HGLLMAFGFT LGFRNYLPMP LVYMGAAFVN RPTFFGGGAK LVHPTVNIRK NVDLGSVEDT 
TPLNAPTRLA TNVRLMKSWA PHTVSNFATS LVSRAPLPDT FSDSRDHFFK HGNVLCRKEK 
ADFFLPGEAF SVCTTVLDAT VVGMDTFTIV YNGGSSTATP VAHGGLVHDT DVTRLEYANG 
QVMITTTIVD ENFASQHSEI EIDEMVAVTI LQNIGEIRQS SRHLIHYHGL PRKGDDIQAR 
PNLRRLQPGL ISNDSLTPAE NSTRLVPSPP SPTTRTVSYP DWKILEWLDE LPTGMAYFIW 
VVLAAIVLIT GFCCVLFSVL PLIYRLESFR AHRAEQLAIA RACAKMDVFT NENLTQCFGS 
NWYNLYIDGT LPLEAIKFDD GLLRVERNRK RYERMME