| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48038 |
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| Symbol | |
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| ID | 7203253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | + |
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| Start bp | 791867 |
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| End bp | 797224 |
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| Gene Length | 5358 bp |
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| Protein Length | 1717 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182300 |
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| Protein GI | 219123997 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.322069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTGGC AAAGGCAACG GGCGGGATCC GAAGACGGAG AAATCGATGA GGAAGAAGGA
GAAATCACAG ATAATCCTCA GCCACCGGTG GCGTTATCGC TGTCTCCTTC GAAGTCTCGT
CCCACCGTCA CCCACTCGCT CCCACCCAGT TCCCAAGCAA CAGGTGCCGC ATTCCATGGC
GAATCAAACT TTCCTCCGCA GCCGCCTTTG CCGAACCGTC TGAGCAGTAC TAGCGGGCCG
AACAGCATCC ATCCCTACCC GGGCGCCAGT CACAGTAGTA GTAACAGCAA CAACAACATA
CCTCCCCCGC GTCGTGGAAG CTGGCGGGGC GGACGTGGCG GTACTAGTGT CGGTGGTGGA
GCCTTTGAAC GACGTCCCGG TCGAGGGTTG GGCCACCGCA ATACTTCTTT CGGCAGCGGA
CCGCCAGCGT TCGACGCGCC CCCACCGGCA CGCAGCCAAA GCTTCCAGTC ATTTCACCGC
CACAGCAGCG GAAGCATTCC AGGCCTTCCC GCCAGCAATG TTCTCCCACC GGTAGCGGCT
ACTGATCCGA GACGGGCGAC GGATCCACGG TTTCGGGGAG CACCCGGCGT TGCGAACACC
CCGGTGTCCG CACCGCATTT TACCGAATCG CGGGCAACCA GCGAGGGCCG GGGCTTTACT
ACCTCGTCCA GTAGTGCTCC GGTATCGGTC AGTAGTACTT TAGCGGATTC AGTCAGTCTG
GCAACACCCT ACAGCAGCTT GGCTGAAGGC AAGCCACCCC ACGTACTAGC TGCTGAAGAC
GCGAAGGTCG TTCGAGGACT CCGTGCCAGT AGTGTCGCGA GAAACGAGTC CATCGGCAAT
GATGTTCCAC GGGATAGCAG CGTCAGTGGG CCCTTCCCGC CACTAGGGGG TTCCACGGAA
ATTGCCTCTT TTCCTGGAGG TTTTCGCGAT AGAGGTCCAC CGCATCGTCG ACATACTGGC
GACTTTCGGG GGCACCCTGG CGGCCACGGC TCGCTCAATC GACGAGTTTC AAGCGAATAT
GGTAGCGGCG ACGGACCGAA TAGCGAAGTC CTACCCTTTG GAAGGCCCAA CGAAATTCAT
CAATCTGCTA GGCAGGGTTC TCAGCATGCA GTCCCCCCAT CCGGTGAGCC ACTGCCGGTG
TCGCGTGGTC AATCCACAGG TAATCAGACT CCTCCACCTC CGTTTCATCG AGGCCCAGCG
CCGCCTCCTA CTCAAGAGCA ACAGCAACCT CCATTCCACC GTAGTCATCC GTTACCGCAG
GATCCACCGC CGGGAGCTTT CCCTCGAGAC GGGCCGCCTC AAGGAGAAGT GCCATCCTTT
TATAGGGATG AGCAATCAGT GTTTTCGCGA AATCAACACA CCCATGGCGG AGATTTCCCA
CCGTTCAACC AAAGAGCTTC GGATCAGCCT CCTTTTTCCT CGGGCCCGCC CAACGTAGAG
CAACCGCTAT TTCGAGGACC AAGACAGGAT TCCTATTACG GACCCGCTTC ACGCGACGTA
AATTCTGGAA GGTTCGGGTC GCCCTCCCAA CGTGATCGCC CCATTGTCAA TGCCCGAGGG
GTTTCGGGAG GTCCTCCACC TCCCCCACCA CCACTGGGAT CGCAAGGGGC GCTCACATCC
ACACAACATC CCTCTTTAGC TCCTGGTGTG GCCCCGCTTC ATCGACGGAA CGATCCACGC
CTTCATCGAG ACCCCGATGC GGAAGGACGA GATTTCGCGG ACGCGGCATC CGCATCCGAG
CCGCTTCGAC CCAATTTTCC ACCCGAGCGC ACCGGATTCC CGATGCAAAG TGAACGCGGT
TTCCGAAAGC CGCCTTTTGG ACAAATGTTT CCACCGGGAG GTGCTACAGA AAATAGTACC
GGCTCGGATT CGTTTGGTCG ATCACGCGAA CGGAATACCG CGGCAGCGCG GTCGCCTCAA
ACGTCACCAC ATACGCGTAA ACCCGTTTTG AGCTACTTTC AGGAATCGCC GGCGAAGGAA
ATTCCGCGTC TGCCTGCCAT AATTGATGCC AAATCGGGCA GTCTGTCGAG TCGAATCAAA
TCTGTAGGTC AACATACCGA AGCAAGGACA GAAGAGCCAG AACCTCTTTT GACATCCGTG
CTTGGTGAGG ATTCAGTGGA TAGGGCGGAA AAGGTTGTAT TGCTTCTGAC TGATCAAAGG
GATAAAGCTA GCTTGGAAAG AGATGATAAG GGATGTAGTG AGCTTCCGAA GAAGCAGACA
ATCCTGATTG CGCTGAATCG TATGGACACC AAAATCAAGC TGCTTCAGAA ATCTACCTTA
GATAAAGAAG AAGAAGTTGA AGCACATATC GAAAAAGAAA AGGAAGATCA AAAACGGGCT
GCTAAAGAGG CGAAATCTGA AGCTGAACGT TTGGAAAAGG AACACAGGCG ACGCCGGGAA
GAGGAACAAC AAGCCGATGA AAAGGCCGAA CAAGAGCAGA TTGAAGGTAT GATAGAAGAA
GGGCAGGCCG GTTTCGATGC AGATCTAACA ATATCTACAG TGACGTTCGA GACCGATCTC
GAAGCAGCTC GTAAGGTAGA AGAAGCAAGG TTTGAGCTAG AATGTCAAGA ACAGATATCT
GCGGCTACGG AGCGATTCGA CAATGATGTG CAAACTACAC AGCAAGAGTT GGAGAATTCT
ATACAATCTA TTTCGAATAC TCAAAACCTA ATTTCGGCTC TCGAGGAGGA GTACAAGTGC
AAGATGGAGG AAGGAGATAC AGTCGGTGAA GAGAAAATGG ATCAACCTGA TCTAGTAAAT
ACAGTTTTGG AAGAAAATCG AAGGCGCGCT GCCGAGGCCC ATGTGTCTCA ATGGGCAGGT
TTCCCTGTGG TGTCGGATGA TGATGAGTAC GGTGTTTTAG AGAACGAAAA GGATCCTAAA
GAAGGTAAAA GTCATGTACG GTGGGCAGAG ATGGCGCAGA AAGTTACCGG AGTCGGAGAT
GCACTCTACA ACGAACCTTC GGAAGCGCCG TATTTTGAGC AAAATGAGAG ACTTCATGCA
CTGATCGGCC CGCTGGTAAC AGAGCAAATA CGCTACAGTC AACGGCAAGT CGACACCCAC
TGGAGAGAAC TTGCCGAAGA ATACGAATAC CGAAGAGTAG TTTACGAGGC TCAACAACTC
AAAGATGGCA CGGCTCAGAG AAGGCGCATC AAATCCACAA GTGTGCCCCA TAGGCTCGTT
GGGAGCAAAC CTAATGTCCC TATCCTCGAG TCCACATCTG GCCACGGACG CTCGTCGAAC
AACCCATATC GTCGGGCACG TAGAGGCAAC GAGGTGCGGA CAGAATACGA ACAAGAACAA
ATTATAGCAG AGCTGGCAGC CAAAGAAGCG CTGGAAAAGA GAATTGCAAC TGGGGGATCA
GAGCTTCCGC GTCAGATAGG TCAGATCGAA AGAAGCTGGA CAGCCACCTA CATCCAAACA
TTTTCGGCGC AAAGGGTTGA CCTTGAGGAA CAGGAGGCAG AGTTACGTAT TACGGGTGTT
TGGACGGACA TGGAAAAGTG CATTTTCTTA GACCGATTTA TGCAGCATCC CAAGGATTTC
CGCAAGATTG CTTCTTTTCT CCGAAATAAG ACGACAACTG ATTGTGTCGC CTTTTATTAC
GATTCCAAGC AAACGCTGCC TTATAAGGGT GCGTTAAAGG AACACGTAAT GCGGCGGAAG
AGACGTGGCG GATATCCAAT TTGGGAAGCA ACTATTCAAG CCGCCCTCTC GGTAGGTGCA
GTCGTTGAAG CAGGGGATAG TGAAGAAAAG CCATTGATCT TCACACTTCC GTTTGATGAT
CACACTTTTT CTACTTTTGG CCTTCATCCT TTGAAACGCG AAGTTTTGGA TTTAATGGAA
ATAAAAGAGC AGGCTCTCGC TGAATTTGAC GCAGATGAGG ATGCAGACGA CGTTTCTAGC
AAATCAGGGC AACCCAAAAA ACGTCCTCGC GATCGTCTTT TCCTGTTGGA TCCGAGACAA
AGAAAATTCC TGAAACCCTT GCCCCAGGAA TCGGCTCACG CTACCTGCCT TAAGGTGGAC
AGTGGAAAAG CAAGCACAGC TGACGATGAT CACAACGATT CCAAAGAGGG TACAGCAAAA
GATGAGTCGG GGCGATTAAC TCCTCTAAGA AAAGCACCCC AAAAATGGAC GGCGTCAGAG
AAAAAGATTT TTCACGATAC CTTGGAGAGT CATGGTAGGA ATTGGAGCAT GCTTTCCCAG
GCTGTAGGGA CAAAAACGAT TTCTCAGATT AAGAATTACT ACTACGACTA CAAGAAGCAG
AAAGATAAAA ATCGGACGAC TGACAAAGAC AAAAAGGTCG AAAGCAAAAC TGAGAGGACC
GAATCTCACG AAAACAGTCC TACACCGCCA CATATTGCCG CGGATCAAAG ACCCGGCGAC
CAGACTAGTA ACGAGCCGAT TTCGGATTTA CGCAAAAATC AGCCGCCTCG CTATGATCCC
CAATTTGAAG CTAAACATAT CGAGCGACAG ATGTTCGAAG TGTTGCAACA GCAAGGGCAG
GGTCCATACC CCGAACAAGA AAGGCTTGTC GATCGACGTC CTGTCGAATC GTTGAGTGAT
CAAGAATTAT GGGCCCAATT ACACCGACAG GGACTTTTGG GTCAACAGCG AGGGCATTTA
TCGGACGAGG CGGCACGGCA CCTTCTCCAG CATCACTCGC AGTCACACCA TCAGCAAGTC
CTCTCAAATT TGATGCCCTG GGCTTCGGGA GGGCAACTTC CGCAGCCAGT CAAACGAGCG
CAACCAATCA ATGTGCAAGA ATGGGAGCAG CTGCAGGCAA TTTTGCAGAT CCAGCGTCAA
CAAGAACAAC ATCGCCATCA GCATCAACCT CACGTACCGC ACAACCCGAT GGCCAACTTG
GACCCTCAAA TGCTTGCGTT GGCCCGTCTC GCTGGTTTGG ATTCCAGCGC ATTGGGTATG
AACCCGCAAT TATCGCGACT TGCGCATCAT CCTGCAGTTG GCTCAGCTGG AAGTCATGAT
GACGCACAAA TGGCTTTAGC ACAACGGCTT CTGAGCTACA GTCAGAGCGC TGGGGGAGGG
GGGAATAGTG CCCAGGGGGC GCTAGATTTG TTGACACAGG CCATGAGTCG TGGGGGTGCC
GGACGCCATC CGAATCCAGA TCGGGGTTCA GATCGGGGTA CAGATCGGTA CTAGAATGGA
TACCTGATCG AGAAAAGTGG TTGGCGTTGG GTGTTGGCCG GGTACACAAG GTTTTTTGTG
CATTCAGAAA AGTTCAACAG CTCAAGTCAA TAGTTTTTGT GTTGAACTGC TCCGCTCTCT
GCTATCGAGC GCTTGATCCG TTGGAATAGC AAATATCTGC CTCTCTTGAT TTTCTATAGT
TTACGGTATT TTCTGACT
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| Protein sequence | MSWQRQRAGS EDGEIDEEEG EITDNPQPPV ALSLSPSKSR PTVTHSLPPS SQATGAAFHG
ESNFPPQPPL PNRLSSTSGP NSIHPYPGAS HSSSNSNNNI PPPRRGSWRG GRGGTSVGGG
AFERRPGRGL GHRNTSFGSG PPAFDAPPPA RSQSFQSFHR HSSGSIPGLP ASNVLPPVAA
TDPRRATDPR FRGAPGVANT PVSAPHFTES RATSEGRGFT TSSSSAPVSV SSTLADSVSL
ATPYSSLAEG KPPHVLAAED AKVVRGLRAS SVARNESIGN DVPRDSSVSG PFPPLGGSTE
IASFPGGFRD RGPPHRRHTG DFRGHPGGHG SLNRRVSSEY GSGDGPNSEV LPFGRPNEIH
QSARQGSQHA VPPSGEPLPV SRGQSTGNQT PPPPFHRGPA PPPTQEQQQP PFHRSHPLPQ
DPPPGAFPRD GPPQGEVPSF YRDEQSVFSR NQHTHGGDFP PFNQRASDQP PFSSGPPNVE
QPLFRGPRQD SYYGPASRDV NSGRFGSPSQ RDRPIVNARG VSGGPPPPPP PLGSQGALTS
TQHPSLAPGV APLHRRNDPR LHRDPDAEGR DFADAASASE PLRPNFPPER TGFPMQSERG
FRKPPFGQMF PPGGATENST GSDSFGRSRE RNTAAARSPQ TSPHTRKPVL SYFQESPAKE
IPRLPAIIDA KSGSLSSRIK SVGQHTEART EEPEPLLTSV LGEDSVDRAE KVVLLLTDQR
DKASLERDDK GCSELPKKQT ILIALNRMDT KIKLLQKSTL DKEEEVEAHI EKEKEDQKRA
AKEAKSEAER LEKEHRRRRE EEQQADEKAE QEQIEGMIEE GQAGFDADLT ISTVTFETDL
EAARKVEEAR FELECQEQIS AATERFDNDV QTTQQELENS IQSISNTQNL ISALEEEYKC
KMEEGDTVGE EKMDQPDLVN TVLEENRRRA AEAHVSQWAG FPVVSDDDEY GVLENEKDPK
EGKSHVRWAE MAQKVTGVGD ALYNEPSEAP YFEQNERLHA LIGPLVTEQI RYSQRQVDTH
WRELAEEYEY RRVVYEAQQL KDGTAQRRRI KSTSVPHRLV GSKPNVPILE STSGHGRSSN
NPYRRARRGN EVRTEYEQEQ IIAELAAKEA LEKRIATGGS ELPRQIGQIE RSWTATYIQT
FSAQRVDLEE QEAELRITGV WTDMEKCIFL DRFMQHPKDF RKIASFLRNK TTTDCVAFYY
DSKQTLPYKG ALKEHVMRRK RRGGYPIWEA TIQAALSVGA VVEAGDSEEK PLIFTLPFDD
HTFSTFGLHP LKREVLDLME IKEQALAEFD ADEDADDVSS KSGQPKKRPR DRLFLLDPRQ
RKFLKPLPQE SAHATCLKVD SGKASTADDD HNDSKEGTAK DESGRLTPLR KAPQKWTASE
KKIFHDTLES HGRNWSMLSQ AVGTKTISQI KNYYYDYKKQ KDKNRTTDKD KKVESKTERT
ESHENSPTPP HIAADQRPGD QTSNEPISDL RKNQPPRYDP QFEAKHIERQ MFEVLQQQGQ
GPYPEQERLV DRRPVESLSD QELWAQLHRQ GLLGQQRGHL SDEAARHLLQ HHSQSHHQQV
LSNLMPWASG GQLPQPVKRA QPINVQEWEQ LQAILQIQRQ QEQHRHQHQP HVPHNPMANL
DPQMLALARL AGLDSSALGM NPQLSRLAHH PAVGSAGSHD DAQMALAQRL LSYSQSAGGG
GNSAQGALDL LTQAMSRGGA GRHPNPDRGS DRGTDRY
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