Gene PHATRDRAFT_48037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48037 
Symbol 
ID7203026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp790609 
End bp791527 
Gene Length919 bp 
Protein Length302 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182457 
Protein GI219124325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0645802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGATTGATC ATGAGCGCTT GGCTACTTTC GGCATTGACA CTTTCGTTGC TGCCTACCTT 
TAGTATGTCT TTGGCAATTC CGAGAGTGAC CGCTTTGTAT CGATACGCGG TCAAGGGGTT
GTCGGAAGAT GTTCTCGACA GCGTCACCTT TGCGAACACG GGGGATACCT TTCCCGACGA
TCGACGATAC GCCTTGCTCC AGCAATCCCG ACGTGATCGA TTCGACGGAA AGTCGTGGTT
GCACAAGGAA AACTTTCTGT GTGCCTTTAC CGAACCGGAA CTGATGGCGA CCCTCCAATC
CTACTATCGA GAAACTACCG CGGGCGAAAA AATACTCACG ATTGTGGATC GGGCCTCGGG
TGATCCGCTC TTTATGGGCA ATCTCGCGAC CGAAGCTGGT CGTGAGCGAT TAGGAGAAAT
GATGTCCGAA ACATCGTCTC AGGATGTAGT TTGCGTTACT GCGTCCGATC CGTCCTCTCC
ACAGCACACT TTTCAGTTTG GCAATACCTC GTCCGGCTTC AAGCAACGCG ATGGGGACAC
CCGAACGCTA CATATTGTCA ACGCACAGAC GGTGCGTTCG TTGAGCGAGA AGATTGGGGT
GGCGCTGGAT CCGCGCCGCT TTCGACCCAA CGTTGTGATC GACGACGTAG ACGCATGGAG
CGAATTCGAT TGGGTACGAT CCAAAGCCAA GTTACGGTGC ATCAACAGTG GATTGGAGTT
GGCCGTCATT GGTAAGACTG TCCGGTGTAA GGGCATTTCC GTGGACCCAA ACGACTTAGG
ACACGTGTTG GATATTCCTG AGCTCTTGAT CAAGCACTTT CCCGAACACG GACCCTATCT
GGGTGTCTAC GCCGTAGTCG ACGCCCCAGG AAAATTGTCG ACTGGTGACA CTTTCGAGAT
CTTGATGGAA GCATCGTGA
 
Protein sequence
MSAWLLSALT LSLLPTFSMS LAIPRVTALY RYAVKGLSED VLDSVTFANT GDTFPDDRRY 
ALLQQSRRDR FDGKSWLHKE NFLCAFTEPE LMATLQSYYR ETTAGEKILT IVDRASGDPL
FMGNLATEAG RERLGEMMSE TSSQDVVCVT ASDPSSPQHT FQFGNTSSGF KQRDGDTRTL
HIVNAQTVRS LSEKIGVALD PRRFRPNVVI DDVDAWSEFD WVRSKAKLRC INSGLELAVI
GKTVRCKGIS VDPNDLGHVL DIPELLIKHF PEHGPYLGVY AVVDAPGKLS TGDTFEILME
AS