| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48032 |
|---|
| Symbol | |
|---|
| ID | 7203023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011683 |
|---|
| Strand | - |
|---|
| Start bp | 767699 |
|---|
| End bp | 768655 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182452 |
|---|
| Protein GI | 219124314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.209972 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAGTGATCAC ATTTCTTTAG TTTACACTGT TGATCCTTGG TCGAAGTAGT TTGCCGCAGA
CGTCGAGACA TGAAATTCCC GGTACTGTTT TTGAATCATG GTGGAGGCCC GCTGCCCTTG
ATGGGCCGGC AGCTCCATTT AGCAGCCCAT ATGAAGCAAG TCGTTAAACA GCATCTTCCG
TTAGAGAAAC CTAAGTCGAT CGTTGTTCTG TCAGCTCACT GGGAAAGCGA TCCAATTAAG
ATATCATCCG CCGAAGCACC AAAGATGTAC TACGATTACA GCGGATTTCC ACCGGAGACG
TATAAATATC AGTATCCAGC TCCAGGGTCT CCCCAACTTG CGACCAAAAT TCACAGTCTT
TTCGAGGACA ATGGTATACC TAGTGAGCTA GATCCGGCTC GGGGCTTTGA CCATGGAGTT
TTTGTACCCT TGATGCTCAT GTATCCCGAT GCTGACATCC CAGTAGTTTG TGTGTCCCTT
CACAGCTCGT TGTCGGCTGA CACCAACATG GAAGTAGGGG CAGCTTTGCA ACCATTAAGA
GACGAAGGTA AGAGATAATT CTTGTTTCAC CAAGCTATTC TTTTTAGCTA GTGAACCCTT
AACGAATTTT CTTTTTCTGA CGTAACTTAC CCGTGAAAAG GAGTCTTGAT TCTGGGATCT
GGCTATACGT TTCACAATAT GCATGCGTTT TTCAATCCAA GCCCAGAGAC GCACGAAGCT
TCCAAATTAT TTAACGAATG GCTCAAGACA ACCATCACTG GCCCTGGGAA TGTGGCGACA
AAGCTCAGTA GGTGGGAGCA GGCTCCAGGC GCTCGTGTTG CCCATCCCAG GGAAGAGCAT
TTGATGCCGC TTCTTATTGT GATGGCGGCA GGTGGAATTG GCACCACTCC AAAAGTAATT
TTTGATTTAC CAGATGACCA CGAAAACCAT GCCGTTTCTG GCTATTTGTT TGAATGA
|
|---|
| Protein sequence | MKFPVLFLNH GGGPLPLMGR QLHLAAHMKQ VVKQHLPLEK PKSIVVLSAH WESDPIKISS
AEAPKMYYDY SGFPPETYKY QYPAPGSPQL ATKIHSLFED NGIPSELDPA RGFDHGVFVP
LMLMYPDADI PVVCVSLHSS LSADTNMEVG AALQPLRDEG VLILGSGYTF HNMHAFFNPS
PETHEASKLF NEWLKTTITG PGNVATKLSR WEQAPGARVA HPREEHLMPL LIVMAAGGIG
TTPKVIFDLP DDHENHAVSG YLFE
|
|---|
| |