Gene PHATRDRAFT_48002 details

Gene Information

• Locus tag: PHATRDRAFT_48002
• ID: 7203001
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: -
• Start bp: 667861
• End bp: 675452
• Gene Length: 7592 bp
• Protein Length: 2001 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002182440
• Protein GI: 219124289

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACCAT TAGCGACGCA CCAGTCCGAG CTGGACTTCC TCCAGACGCA GCTGTCTGCG 
CTGGCGAGCG AAGGCGATCG ATTAACGTCC TCCTTCACGT ACGGTCAGGA AGCCACCACG 
AAATTGCCGG GTACGTCGGC TACTGTTTTC CTTTGCCGTC TATCTGTATT TGTCAGTGTG 
CAGCCTACGT CCTCGTCCCA TCTCACTTCA ATTGCTGGTC TTTGTCACTG CTTACCCTAC 
CACGACAGAT CCTCCGCTAG CCTCGCAATT CGTTCGGCAG CAAGCGCATC GCGTACGAGC 
GTCGGAACGT CATTTGCTGC ACTTGACCGA ACAGATTCTA CAGTATCGTC GTAAGGTCGT 
CGATGACGAC CAGGACGACA CCGATCGTCC ACAACCAATG ACTCTAACGG AACTCGCACA 
CGTCGTACGA TCTATACACC ACCTAGAAAC CCAACAAATT GCTCGTTTGG AGGAGCTGTG 
GGCACACCTC GACAAAGATG CACAACAAGG TTCGACACCG CTTCCGTCAC CGAATAATCC 
TATCGAAGAC CCATCAACGT CGTATCCCTG GTCCATGAAG GGTCCATTGG ATGCAGTGGA 
GGAAACCGAC AACGAAACGG ACCGCACGGC TCGATCTTCC CGTTCGTCGG GTTTCGGTTC 
GGCACAATCA CGTCGATACC GTACGGATTC GCTCCGGACT CCATCCACGC CTTCCGGACA 
CTCCGTACGA CTATCCACCA GTACCACCAA AACACTCGAA CGTCGAGGCT TGCTCCGCCA 
TTCAACGGGT ACGCAACCGG AACGGCCGTC ACCGGCATCG CGACCTAATC CACTGTTTCA 
GCAAGCGTTT GCGGCGTTGG AACACAAACT GGCGACAGAA TTACACCAAA TCAACGGCAA 
GGTGACTCCA CACGTACAGT CCGTCGAGAC TGACACCACC ACCAACACCA ACAAAGGCTT 
CGACTACAAC TATAACAAGG AGAACAACGC CGTTTCCGAC ACGGACGAAG AAAAATCCAT 
GCTCGACGGC TCGTTGGACG AGAGTAGTTA CGACGGACAC ACCATTGCTA CAGTGTCGAC 
CAAAGTTAAT CCGCATAAAA GACTCTCTAC TGTACGCGCA GCGGAACCTT TACCTCCACA 
CTCAGATCCA ACCACACAAA GCATCTCGTC GGCCAGTGAA TCATCGGATA TCTTTGACGA 
TGACGACGAT GATCACGGCA CATACGATGA CTCGGCCATG TACTGTCCAA CCCTGGTGGC 
TCCACCGCAT CGTAGTCTGA CGCGCGCCGT CGGTACAACA CCCCAGACCG CAGGAGACGC 
ACACGACGTG ACGCACATCG AGGTTGACGT AACAGCGTCG CCTTCCAATA CCAATCTCAC 
CATGGACGTC ACCACTCTCT ATGACGAAGA CGAGCTTTTG GACCACTCGG CTACTTCGGA 
CCACCTTTTG GACGCCAGCT TTGCATCGAC TGAGACGCCC ATCCTGGACC GATATCGCTT 
GGATCCGGAC GATGAGTTCC CGAACGGATT TAAGGTTGTT CCCAATCGCC GAGGCCAGCA 
CCATCGCAGT AAGGTTGTTA GTGACCACAA AGCCGAAGCA CATCGTCCAC ACCCATTGAT 
TTGTAAGGAA CACAGACGCG TCGCCGGATC TATACACGAC GTACAAACCC AACACGTCAC 
TCGCTTGGGT GAGCGACGGG GACATCTCGC CACGAATCGG CACGGTTCGG CGCCGCTTCC 
GTCAACGGAT TGTCGTCGCG CCAGCGCAGC AACATCGCTT CCATGGTCAA TGAAGGGTCC 
CCTGGACGCT GTGATGGAAA CTGAGAACGA AACAGAGCGC AGCGTTGGAT CGTCCGAAAC 
GCCCATACTG GACCGGTATC GCTTGGATCC GGACGACGAG TCCCCGAACG GATTCCGGGT 
CGTCCCCAAT CGTCGAGGCC AGCACCACTG CGGTAAAGGT CACGACGCGA GTCGAAAATC 
CCTGCGCAAC GAAGGAAACC ACGCGGCCGA GGAAAGTCCT ACCGTCTCGA CACGGCGTGG 
TTCCTCCCGA CGGGCGTACC GAAAGACTCC GTTTCCCACA CAGAAGAGAA CACCATTGGA 
GCCACTTATT GACGAGAATG AAGTGCTAGA AAGCGACAAT GATGCTTCGT TCGACAAGCC 
ACAATTCCCA GAGGGGGCGG GGATGACTCC CCGGCGTCCC TCAATGAATC TGTCTAGTAG 
CATGAGACGC TGGAGTTCCT CTCCGGCCAC GGAATATCCA GCCAGTGGCT ACGGGAGTGG 
TCGTGCTTCG CTACCAACGT CACTGTTGTA CGCCACCGCA CAACTTTCGA CACCCCGACC 
GCCGCCGTTG GCGACTCGGA CCCAATCTAC GATTCCGCCG TTGCGTCCGA AAGCGTCATT 
ATCGGAACAC CAGTCGTCCC GTTCTGCCTA TCTTATACCA CCGATTGGCG ACGCGGAATA 
TAACGAGGCT CCACGCGTTG TTCGCATGCA AGTTGCCTTA AACGACGTAC AACTTGCTGT 
GTCGGCGTTG AACGAGGTCT TGGCGGTGGC ACAATCGCGG TCGCCAAAAA GTGTGCGATA 
CATCCGAGAG GAAGAAGCGA AATCGATTTT GGAACCGTTG GGTTTAGATG GGCGCAAAAG 
CAAGAGTATT CTGATGAGCC TATGTCATTG GAGACGGTTG GTAATGCATC GGGAGGAGCA 
CGGAATTGTG TTTACAATTG TAGGTGACCA AGACTGACAG TGAACCCATT CCTTGGTCGA 
GTTGCTTGTA GCTCTCGTGT TTGAATGTAT TTGTAAACTT GTGATGGTTT GTGCTACTAT 
CACTTTTTTC TACTGCTACT GCTACTTTTG GATGCAGTTT CGGGTGGTCT GCTCCTTTCA 
AATTTGCGCC AAAGTAAAAC AATAGCGTGT GACGCGTCGT CAGGAGTTAT TTACTGTCAT 
GTCGTTGGAG AGCGGAACGG CGATTCCACA TGATACGCTT TATTAGGCAT TGGTACTGTC 
CAAATGTAAA CAGAATGTCG TAGAGGCATT CCTACTTTCC AAAAAGTTAT AATTGTTTGG 
CGGGAAAAGC CGACACCTTA CGTTTTTCAA GTTGTTCAGT TAGCATTCTG AATACCACTG 
GTAGTACTAC TGGTTCGCTG GCTGGATTTC ACTGCTCCCA ACTATTGGCA CTGACAGTGA 
TCCGCCGCAC CCTCGCCTTT GGAGTGCCAA CCTTGTGGCT TGGGTTTGTC TACCCTTCCT 
ACTATTGCGG GTTATCCCGA GCTTCGAGAC CATAGCACAC CGCCAATGAA GCAGCTCTTC 
TGTTAGAGAT TGGATCCGAG ACGCGAATCG GTCTAATAGA GGGGACAGCC AGTCGGATCG 
CCGAGGAAGA CGCTAGTAGC AATCGACTCT GACGAATCGA TCCGAGAGGT GATACAGAAG 
TAGTGCTTAT ACTAATACTT CTAGTACTGC GGCTGTGCTA GGCTATTGCT CATGACGGAC 
GCTCCTTGCT CTTCCGCGAG AGAGCAGTCG ATCCCGTCAT CAGCTACCAA GCCGGCTACG 
AATGCGGGTG CGGGTTTAGT GCAGCAACTG TTGTTTCCAG GCTTTACCGA TGCCGGTTCC 
GACGACACCT TCCAAGCACC GTCGCCGTCA TCGTTACCCT CCGACGGAAA TCTGGAGCCT 
ACTAATCCCT CAGAAGTAAC GTGTGTGGAC GACACAAACG ACAGCGTCGT ATCCGAAGAA 
GCTCCGACCG AAATACACGA AAATTTGACC CGGAATCAAT CCCGTGCTGG TGAATCGTCT 
AGGTTGGTGT CGACCAACGC CGTCCGCTTG CCCCGATCCA TCGATACCCC GACGACGACA 
ACAATGGACA CTATGGTATC CCACTTTCCT CCCTTTTTCG CCACCACCAA GCCGTCCCGC 
CCGACTACCA CTCTCGCCTG CACGTCTCCA TCGGATCCTG TATCCCCGCC CCGAGTGCCC 
CGGGTGGGGG TCCCGGCGAC GCTCACGAGC TCCATCGTGG TGGGCACCGG ACTGAGCAAT 
CCCGTGGAGA CGGCGGACCA CAGTTTGGCC GATGATGATG ACGACGACGA CCACAGTATC 
GATAGCGACG ACAGTGACGA TCTTCAACGG AAGGAAACGA ATGATACGGA AAACGTTTTT 
GGGGACGATA CAGCGACAAT CGATGCCACC GTGACACGGC CACTCAATAT TCCACTTGAT 
GAAGCCATGC AACAACGAGC GCTGCATGGC CTCGACTACC CCATTGATAA CCACGATCAC 
TGGGAAGAAG AAGCCAATCC ATCCCAAACG GACTTTGGAA AACAGCTCAT GTTTCAACGA 
AATATGGAAA CGTCGTCGGA TGTCTTGTCG ACCGCCTCCG AAATGGGTAC CGTCATTGGA 
ATAGAGCGCA TGCACGACAT TGAAGCCATG GAAGCCCCAT CAATGGAGAG GCCCGAAACC 
AAGACTCCCA AGGTGGTTGC GGCACAATCA CCCCGGATTT ACTCATCTTC TCCGGATGAC 
GAGCTCTACT TAGAGAAGAT ATGGGATGCG GATGCGTTGA ACCTTCCCAT GTTGGACCCC 
GCCCAACGTA CGTTCCCTCA AAAGCCCGCG GGGTGCGCTC GCGGCGAAGT TTACAATTTT 
GACAATTCTC AGGTCCGGAA ATTGGACAAA GCCTCGACTA TATTGTCGTC CGCTATTCGG 
AGAATCGGAT CCGGCCTGAC GGGTGCCAGT GGTCACGGTC CCAAGCATTC GGCTTCGGCA 
CCGTCTACTC CACGTACCTT GGCTGTCCGT CGCGGATACC CTTTTTCGTC GCCCCACACG 
GCTTGCGAAA TATCGCCGTC CAAAACCCCG TCCTCCTTTC TCTTGCGCTC CCCGGGATCG 
TTGGCACACC TTGCAGCGCA CTCTCACTCC CGACGAAAAA GCCGCCAAGA CCCGTCGCCG 
CGCGCCGCCT CCGGCTTCTT TTGGGAACGA CCGAGACCGA CCAACGTGAT GAGAATACCG 
GACGGTCGGG TCGTCAATAA TCAAAGACAC TCGTCCGTTT TGCCACTCAG CATACCGCGT 
TCCTGTTTTT CCTTCGACAC CAACGACAAT GCCATGGACG AGCACAAGAC ATACCGACCA 
GACGCGGCGC CGCGGTCATC CTGGCACGAG AGGAACCACC CCGGCCAGAA TGGATCCCAA 
CGCTTCGCCA CAAGCCGAGA ATCCAGAGCG CCACTGCTTC GCAGCAGTGC GAGCTGGGAC 
ACAGCGTCTG GAGTATCCCA AGAGCACTCT TTCGACCTTC GTCGTCGTTT GTCCGGAATC 
GTGGTGGCCC ATTGGCCCAC CGTTACGGCA GCGCTTTTGA TTTTCCGCAG CGGGGAGGTG 
AATCCCAGCT TCCGGAACGT CGGGTGCGGA TCATGAGTGA TTATAGTCCG CCCGTGAACG 
CGGACACTTC CTTGGAACTC CAGACTCCGC AGCGTATCAA ATTGGAACGT GAAGACGCTC 
TCGACATTCT GACATGTTTG GTGGAGAGAG GAGTCGCTTT CAACGAGCCA TTCCAGCCGT 
CTCCGACAAA GATTAATAAC GGAAACGCCC GAGATTTCTT GATCGAACGA AAACCTGTCC 
AGCGATTTGA GTCGGCCGAT ATTGACCAAG TGATAAGGCA CCTCAAGCAG CTCAGCGAGA 
GAGACAGAGA CGCTGATGGA GAAAAAGGGG AGATTGAACA TGCACACATG GACGTTCTGG 
AAGAACTTGT ACGCTCGCAC GAATACGCAT TGGAAATGAA TCGAGCGTCA CAGTCGGCAG 
CGTCTTGGCT AAAATCAATT GGACGTTCCC AGCCAGACAC TCGCGAAGAG GAGGGCAAAC 
ACAGCTCGAG CAACAGCGAT GTAGATGACA AAAACTTCGA TCGTGTGACA TCTAAGGAAA 
ACCATTCTGC TGGTGAAGGC GCTGCCGAAT GTATGGACTT TGTGACTACG AAAGCAATGC 
TGAATTCGGC ACGAATGAAA CTTAAGGAAA AAGCCATATA TGCGGATCGT TTGAACGAAG 
AGCTGGCCAA ATGCAGAGCA GAGATCGGTC GGCTTAAAAG CGCTTCTCAT TCCATTTCTT 
TTCGGTCGCC GAACCGTAGC ATTCTGGACC AGAGCGAAGA TGTTTCGGTC GAAGAGGAAG 
AAGCTGAGGA GGCAATCGAA CGGTCTACCG AGTCCGGATT TCCCCTCGAC AAGACGGATG 
ATTATTTGAA TTTCGATACA TCTTTTCTTC AACATACTGC AGATTCTCCT TTGCTCTTGG 
AAGAGCAGAG CGAGCTAAAC AAATACAAAA CCGCCCTTGA AAAAGCCAAT GAGCAGATAC 
GAATACTTTA TGAAGATTTG CAGAGCGGGT CTGAAGTACG CGGCATGGCT AAAACGAAAG 
CACCAATTGT TGTAGTAGAG TCACCGCCCT CTTCACCTCG CAAGGTCGAA AGCCCAAGCA 
ACAAAGAGGA GCGTATGGTG AATGTGCGAA TGCTAGACGC GGAAAACTTT GTTACGGAAT 
GGGACGGTAT TACACCACCG CTACCCCCTC CACCAGATCA CGGTCTACGT TCCCCAATCG 
TCGCAGCTGT TTTGCAAGAG TGGAGTGAGG ACAGCGGTTT GCACGAATCG TTGCTTTCCT 
GGATAGATCA GATACTCGGA GGCGCGGATC CCTACACTAT ACCGCCACTT ACTATTTCGA 
GCTTAGATCA TCAGGTCCGA GACGGCTTTG TCATGCACGT CCTTCCATTA TTACTGCGGC 
GAGCTGACAT TCGGGTCGAT GTCAAGACGC GGACACACCG TCGAACAACG TACGATTTGG 
CGATAGCCGT GGAGAGTTTA TCACCTTCCG GCTTTGACGC TACTCACTTA GACCTTAACC 
GACACCTGGA GACGCGGTCG GCACGGTCGG ATGTTGGCTC GGCCAGCGTA GCGTGCAGTG 
CGGCCACGAC AGCGATCACA ACTAACATTC CTACGGCAGG AGTACGTCCC CAACTGTTGG 
CCTCGTCATT GGGGCTGAAT ACAAACATTA CTCCACGCAA CAGCGAGCCC CGGGACAACA 
TATCGTCGCG CTTGTCGTAC GACGAAATGT CTGAAAGTAT TTCCACAAGG GCACAACCAG 
GTCTCATGAG CACCCTTGGC GGAGCCTTGG GGGGCTTGCT GACACGCCGT AAGTCTACCC 
CCGGGTCGAC ATTATACTCG ACGCAGCCTT TTCCGCGCGG ACCGGGCGAC AGTATTGCTG 
AAGGTGCGGT GGTAACGACC ATCCCCGAAG AAGGCTCCAA CAACCTACAA CATGCTGAAG 
ACGACAACGA CGACGAGGAG GGACAACCAT ATCATCGGTT AGTGTCGGCC CCAGCCGGTC 
GTATCGGTGT GACCTTTGTT GACTTTCGAG GCCACGCGAT GGTGAGCGAT GTGGCCACGG 
ACAGCCCCCT TGGAGGCTGG ATTTTTCCTT CCGATATTTT GATTGCCATC GACGAGTTGC 
CCGTTTCGGG AATGCGTATT CGCGACATTA TCAAGATTTT GAAGGACCGG CACAGCCGGC 
AGCGGGCGTT ACGTGTCATT AGTAGCCACA CAATGAACGA TGCCATGTTG GCGAGCAACC 
TGTTGAACGA CTCGGCCTCT GATATTCATT GA 

 

Protein sequence

MAPLATHQSE LDFLQTQLSA LASEGDRLTS SFTYGQEATT KLPDPPLASQ FVRQQAHRVR 
ASERHLLHLT EQILQYRRKV VDDDQDDTDR PQPMTLTELA HVVRSIHHLE TQQIARLEEL 
WAHLDKDAQQ GSTPLPSPNN PIEDPSTSYP WSMKGPLDAV EETDNETDRT ARSSRSSGFG 
SAQSRRYRTD SLRTPSTPSG HSVRLSTSTT KTLERRGLLR HSTGTQPERP SPASRPNPLF 
QQAFAALEHK LATELHQING KVTPHVQSVE TDTTTNTNKG FDYNYNKENN AVSDTDEEKS 
MLDGSLDETE PLPPHSDPTT QSISSASESS DIFDDDDDDH GTYDDSAMYC PTLVAPPHRS 
LTRAVGTTPQ TAGDAHDVTH IEVDVTASPS NTNLTMDVTT LYDEDELLDH SATSDHLLDA 
SFASTETPIL DRYRLDPDDE FPNGFKVVPN RRGQHHRKRS VGSSETPILD RYRLDPDDES 
PNGFRVVPNR RGQHHCGKGH DASRKSLRNE GNHAAEESPT VSTRRGSSRR AYRKTPFPTQ 
KRTPLEPLID ENEVLESDND ASFDKPQFPE GAGMTPRRPS MNLSSSMRRW SSSPATEYPA 
SGYGSGRASL PTSLLYATAQ LSTPRPPPLA TRTQSTIPPL RPKASLSEHQ SSRSAYLIPP 
IGDAEYNEAP RVVRMQVALN DVQLAVSALN EVLAVAQSRS PKSVRYIREE EAKSILEPLG 
LDGRKSKSIL MSLCHWRRLV MHREEHGIVF TIFRVVCSFQ ICAKYYWFAG WISLLPTIGT 
DSDPPHPRLW SANLVAWYCG CARLLLMTDA PCSSAREQSI PSSATKPATN AGAGLVQQLL 
FPGFTDAGSD DTFQAPSPSS LPSDGNLEPT NPSEVTVVSE EAPTEIHENL TRNQSRAGES 
SRLVSTNAVR LPRSIDTPTT TTMDTMVSHF PPFFATTKPS RPTTTLACTS PSDPVSPPRV 
PRVGVPATLT SSIVVGTGLS NPVETADHSL ADDDDDDDHS IDSDDSDDLQ RKETNDTENV 
FGDDTATIDA TVTRPLNIPL DEAMQQRALH GLDYPIDNHD HWEEEANPSQ TDFGKQLMFQ 
RNMETSSDVL STASEMGTVI GIERMHDIEA MEAPSMERPE TKTPKVVAAQ SPRIYSSSPD 
DELYLEKIWD ADALNLPMLD PAQRTFPQKP AGCARGEVYN FDNSQVRKLD KASTILSSAI 
RRIGSGLTGA SGHGPKHSAS APSTPRTLAV RRGYPFSSPH TACEISPSKT PSSFLLRSPG 
SLAHLAAHSH SRRKSRQDPS PRAASGFFWE RPRPTNRGGE SQLPERRVRI MSDYSPPVNA 
DTSLELQTPQ RIKLEREDAL DILTCLVERG VAFNEPFQPS PTKINNGNAR DFLIERKPVQ 
RFESADIDQV IRHLKQLSER DRDADGEKGE IEHAHMDVLE ELVRSHEYAL EMNRASQSAA 
SWLKSIGRSQ PDTREEEGKH SSSNSDVDDK NFDRVTSKEN HSAGEGAAEC MDFVTTKAML 
NSARMKLKEK AIYADRLNEE LAKCRAEIGR LKSASHSISF RSPNRSILDQ SEDVSVEEEE 
AEEAIERSTE SGFPLDKTDD YLNFDTSFLQ HTADSPLLLE EQSELNKYKT ALEKANEQIR 
ILYEDLQSGS EVRGMAKTKA PIVVVESPPS SPRKVESPSN KEERMVNVRM LDAENFVTEW 
DGITPPLPPP PDHDHQVRDG FVMHVLPLLL RRADIRVDVK TRTHRRTTYD LAIAVESLSP 
SGFDATHLDL NRHLETRSAR SDVGSASVAC SAATTAITTN IPTAGVRPQL LASSLGLNTN 
ITPRNSEPRD NISSRLSYDE MSESISTRAQ PGLMSTLGGA LGGLLTRRKS TPGSTLYSTQ 
PFPRGPGDSI AEGAVVTTIP EEGSNNLQHA EDDNDDEEGQ PYHRLVSAPA GRIGVTFVDF 
RGHAMVSDVA TDSPLGGWIF PSDILIAIDE LPVSGMRIRD IIKILKDRHS RQRALRVISS 
HTMNDAMLAS NLLNDSASDI H