| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47985 |
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| Symbol | |
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| ID | 7203215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | - |
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| Start bp | 620992 |
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| End bp | 623881 |
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| Gene Length | 2890 bp |
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| Protein Length | 932 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182434 |
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| Protein GI | 219124277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCTC GCTTTTTTGT TTGTTTCGTC ATACTGTCCA GCCCGCTCAC TGTCGCCACG
GCATTGTCGA CCTCAATTGT GGATAATGTT TCCAATGCAT CTCTTCGGCG TTGCAACCGT
GCCAAAGGCA GTCGACTTTT TCTCTCTTCG GATTATGATG AAAATTTTAG TTCGGGGCAC
GGTGGGACCA ATCGACGAGA GTTTCTCACT TGGGGGCCAG CGGCGACTAC GGCCTTGTCG
GTCTTCGACT TTGGTAGCCC TCGCAACGCT TTCGCTGCAA ATTTGTTCGA TTCGCCTTAT
TTGCCCAAAG CAAACGAAAA AGATGTAGAG CGAATACCGT ATTCCTCGGC CCGTAAGTAT
AAGACAGTGA CTCTAGCGAA TGGCCTCCGT GCATTGCTTG TTAACGACAA ACGCGCATTT
CGCTCATCAG CAGCTCTAAG CATTGCTGGG GCGGGACAGT TTGCCGATCC CCAAGATTTG
CCTGGACTGG CGCACTTGAT GGAGCACATG ATCTTGAGCT TCAAATCAAG GTCAAGCTTT
GGGAAATCCA AGGACTTTGA GGATTGGCTG GCTGACGTGG AAGGTGCGTC CAACGCATTT
ACTGCATATG ATACCGTCTG CTTTCATTTT TCTTGTCCAG ACGTGGCATT GTCGGAAGCG
TTAGATCGGT TCTCGGGATT GTTTTTGGAA TCGAATGTGG TCCAGGTCTG TCGAACAGAA
AAGACTGTTC GACGTGAGAT TCGGCGCGTG GATTCAGAAC TTGATTTTGA GGATCCAAAT
ATCCAAGCTC TTTATCTCGC GAAAGACTTC GTCAATCCTG AGAATCCGTA CTCACGATTC
TCAGCGGGAA ATTTGAATAC GCTAGAGCGG ACGCCAAAAG AGCTGGGGGT TGATGTTGGT
GAAAGACTAA TTGAGTTTTT CAGGAGTCGA TATCGTCCTG AGCAAGCCGT CCTCGTTGTT
GTCAGCCCCC AGGATTTCTT TACAACTGGA AGATGGATTG CACCGTTTAG TAGCATACTT
TCTCGTTGGA GAGTAACTGA CGTCACAACG TCAAGGAAAA ACATCTATCC TGGGGGTTTC
CTGTTAGGCA ATAGGCTAAA GCATATGGTC CTCTATTGCA AAGGCGAGTC CCAGACCGAG
AAGATATCAT TTGAGTGGAC CCTTGGTCTC GATTATGCTG ACATTGGATC AGCAAGCAAA
CCTTTTGTGA CTGCCACGCA AATAGGATTC ATTTTATCAC AAATAATTAG TCGCAGAGGG
CCAGGTTCTC TATATCAGTA TCTCCTACGT CGAGGCTGGG TCCCAAGCGG TAACACAGGC
GTACCTCGGA TCACAATACC ACTCGAAGTC TCAAGATTCC AAATTATCAA GATCGAAGTG
CTACTCACGA CGGAAGGCTA CTTAAATCGA TCGAGTGTTG TCGCCGCCGT ATATGATTGC
ATTGATTTAA TCAAGAAAGG ACAAACGTTT AAGCTGCCTC GAGAGCTCAT AAGCCAGTAT
GTGAATGTGG CCAAACTTTT TGGCTACACA CTGGCACCGA GACCACCCGA TGCCATAGAA
TTAGCGATAG ATGCGCAGAT ATTTGGCGTT GGTGGTCCCA ACAATGTTGG CTCCGGAAAG
TGGTACCGCT TCATAGCTAT CGACGAACGG GGCGCTACCG CTTTGCTCCA GAGAACCATA
TCCATAGCTC TTGCAACAAT GAGCGATCCT TCCAACGCAC TGATTATCGC AAGCGCTGGA
AATAACGCTT TAAAACAAGA GGGAATGCGA TTACCCCTCG ATGGAAAGCC TTCAACACCT
TCGTCCAAGT GGCTATCTGA ACCTGTCACA GGTGGTCTTT TTTTCTTCGA CGACATGCTA
CGTAGAAGGG CTGGGGTAGA GACTTTGATT CTATCAAAGC TGGTCTTTGA TGAGGAACTT
GTTCGACCAG TTTTCAACCC ACTGATTCCC ATAGCGCTTC GACCGCCAAG GAATGTAATA
GAACCAGAAG GCTTTTCCAA CACCAACGAG CGTCTGACTT TTGAAACGGA TCAAGACGTA
TCGTTGTCGA AGGATGGGAA TTGGAAAATT TTGGGTGCCG AACCCGGACA GGTTGGCCTT
CCGCTTCCTC GCTGTCCGCC TGAAACAACC TGTCGATGCG CTTTCACTCT CCAGTTACTG
TCACCTCGTC CAGCGAGAGC AAATGTACGA CAGGCGGCCT TCGCCGAACT TTGGAAACTT
TCTTTAGAGT TGGCGATTAC GGATTTGGCC GAGCTCGGAG CGCCGGGGAG CCTGGCATAC
GATATCAGTT TTAACAAGTT CGGTCTCCGC TTGACATTTC TAGGTATCAG TCAAAATATT
TCGTCCTACG CGCGGAGGAT TTGTCGTCGT TTGGTAAAAC ACCACTTCAC TCTTCTGACT
GGCCCGGAGA TGCTGCCGCC GTCTCTAACA GCGATGGCAG TTTCGACTGC AAGTCGTGTA
CCGAATCTTT CGCAACAGAG ACGAAGTCCT ATCGTCAGCA ATTTGCGTCG TGCGACGTCT
TATGATGCTG CAACCGAAGG CATTGCTTTC CTGCGATCTT GTTCGGGCGC TGTTTGCTTT
GCGGAGGGGG ATCTTCTTCA GTCCGAAGTG GTAGCTTTGC TTAGTGATCT TAATGATATT
TTCTCCGAAA GCATCGGCTC TGGTTCGCGT TCTTCCGCTG CAATACCTAC AATCAATGAC
CTTGTCTACA AACCGGTATG GAAGCCTCGC TTTGCTTCTT CATGTGCCGT CCCGGGAGTG
GCGTTAGTGT CAGACGCGTG CGGCCGGTTA CCGAGATAGC ACTCTGGCAT TTGATCTAGT
TTTTCAGCGT TTGGATGCTC ATAATATGTA TCGAGTGTAC AAAACATGTG AAAACAAGCC
AGATCTGCTC
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| Protein sequence | MDARFFVCFV ILSSPLTVAT ALSTSIVDNV SNASLRRCNR AKGSRLFLSS DYDENFSSGH
GGTNRREFLT WGPAATTALS VFDFGSPRNA FAANLFDSPY LPKANEKDVE RIPYSSARKY
KTVTLANGLR ALLVNDKRAF RSSAALSIAG AGQFADPQDL PGLAHLMEHM ILSFKSRSSF
GKSKDFEDWL ADVEGASNAF TAYDTVCFHF SCPDVALSEA LDRFSGLFLE SNVVQVCRTE
KTVRREIRRV DSELDFEDPN IQALYLAKDF VNPENPYSRF SAGNLNTLER TPKELGVDVG
ERLIEFFRSR YRPEQAVLVV VSPQDFFTTG RWIAPFSSIL SRWRVTDVTT SRKNIYPGGF
LLGNRLKHMV LYCKGESQTE KISFEWTLGL DYADIGSASK PFVTATQIGF ILSQIISRRG
PGSLYQYLLR RGWVPSGNTG VPRITIPLEV SRFQIIKIEV LLTTEGYLNR SSVVAAVYDC
IDLIKKGQTF KLPRELISQY VNVAKLFGYT LAPRPPDAIE LAIDAQIFGV GGPNNVGSGK
WYRFIAIDER GATALLQRTI SIALATMSDP SNALIIASAG NNALKQEGMR LPLDGKPSTP
SSKWLSEPVT GGLFFFDDML RRRAGVETLI LSKLVFDEEL VRPVFNPLIP IALRPPRNVI
EPEGFSNTNE RLTFETDQDV SLSKDGNWKI LGAEPGQVGL PLPRCPPETT CRCAFTLQLL
SPRPARANVR QAAFAELWKL SLELAITDLA ELGAPGSLAY DISFNKFGLR LTFLGISQNI
SSYARRICRR LVKHHFTLLT GPEMLPPSLT AMAVSTASRV PNLSQQRRSP IVSNLRRATS
YDAATEGIAF LRSCSGAVCF AEGDLLQSEV VALLSDLNDI FSESIGSGSR SSAAIPTIND
LVYKPVWKPR FASSCAVPGV ALVSDACGRL PR
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