| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47974 |
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| Symbol | |
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| ID | 7203223 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | - |
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| Start bp | 598961 |
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| End bp | 602043 |
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| Gene Length | 3083 bp |
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| Protein Length | 897 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182428 |
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| Protein GI | 219124264 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0286581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GATCTCCATC GTCGTTTTGT GTTCTTCAAT AGAACTACGA AGCAACCCCT CCGTCTCTCT
GCTCCCAGCC CTGCCCTACC GTCCATCCGC CTTATCCTCA GTCCCAATGT CGACCTCCGC
TCAATTCAAA CTGAGCGACT TTCCTCACAA AGTCCTCGAA CCCATTGCCA CCCTCACCGC
CCCACCGACT TACGCCACTC TCAAAGTGGC CCAACGTCAA CTCAGTACCA ACGCCGCCGC
CATCCCTACG CTCAACGGCG GCGGCGCGCA CGGCCACATG GCCCTCACAC TTACTGCCCG
CGCCTACGCC GACATCAGCG ACGTCCCGTT CGACATCCCC GTCGCCCCTC CGGCCAACCC
TCCCGTCGGC ACCACGCAAC CGCAAATCAC CGAGTTCAAC CGCATCCACC AACGCGATGC
CGACATTTAC AACCTTTATG TCGCCGTCAA TAACGCCCTC CGTCAGCAAC TCCTCGACGC
CATCCCGAAA ATCTACGTAC GCGCCCTCGG GCATCCCATT TTCGAATTCA GCACCGTCAC
CTGCCTCGAT CTGCTCTCTC ACCTTTGGAC CAAATACGGC ACCATCAAGC CCGCCGACCT
TCAGAACAAT TTGCAGTCCA TGTATACCCC GTGGAACACC GCTGAGCCCC TTGAGACTGT
TTTCCTTCAG CTCGACAACG CCATTGCGTT CTCTATTGAC GGCAACGACC CCATCTCTGA
GGCCGCCGCA GTTCGTGCCG GCTACGATGT CCTTGCCCAC TCCGGCCTTT TTCCCCAAGA
CTGCAAGGAG TGGCGGAAAT TACCCCTTGT TTCTCACACC CTTGCCAACT TCCAGGCCCA
CTTCACTCTT GCCGACAAAG ACCGGCGCCT CACGGCCACT ACTGGATCCC TCGGCTACGC
GAATGTGCTC ACGGCCACTC CCTCGCTTGC TCCCACCATT AGCTTGGACC CTCTCAGCCT
TCCTTTCTCA GCTCTCTCTA TGTCGGATTC CTCTGTTCAC TCGCCTGCCA TGACCTACTG
CTGGACTCAC GGCACCAGCA AAAACCGGCG CCATACCAGC ACCACTTGCA AGAACAAGGC
ACCGGGCCAT CGCGACGACG CGACGGCGAC CAACACGCTT GGCGGCTCCA CCAAAATTTG
GACAGCCCCC AAGCCCCCTG AATAGGAAGG AGGGACGGCT ACGCCGATGA CTAACTCTAG
TAATATCGAT CATTTAAATC ATATTACTAG TCTTAATTCA TCTGTAGTCC CCTCCCCGCC
TAGTCCACAC ACCTCAGCAA TTGCCGACAC AGGCTGCACC GGTCATTACA TCACGGTTGA
CTGCCCCCAC CAAAACAAAC AACCAGCAAA CCCAAGCCTC TCCGTCTGTG TCCCCAACGG
CTCCGTCCTC CGCTCAAGCC ACGTTGCCAC CCTGGCCCTT CCTGGTTTCT CCCCTACCGC
CTGCCAAGCC CACATATTTC CTGGGCTCGC TTCACATCCG CTCCTCTCCA TTGGCCAACT
ATGCGACGAC AGCTGCACAG CCACCTTCTC AGCCACTCGC CTCGACATTC ATCGCGACCA
AACGCTGCTG CTCTCCGGCA CCCGCTCCCG CCACACCGGC CTCTGGCACC TCGATCTCGC
CCCATCCCCT CCTCCCGCCA CAGCCCATGC TCTCATCCCT CATTCCTCCC TGACCGACCG
CATTGCCTTT ATCCATGCCT CCCTCTTCTC CCCGGCTCTC TCTACTTGGT GCAACGCCAT
CGACTCCGGT CATCTAACCA CCTTCCCGGA CATCACCGCC CGCCAAGTAT GCAAATACCC
ACCGGCCTCC CCTGCCATGA TTAAAGGCCA CCTCGATCAA CAACGGGCCA ACCTCCGGTC
CACCAAGTCT CCTCCCATTG GTCCCCTGGC GGCCCCCATT GCCCCTACTG CCACCTCAGC
TCACGACCGC CCACCTGTTG CTCGCACGCA CCACGTCTTT GCCACCCATC AGCGCGTCAC
TGGACAGATC TACACTGACC AACCAGGCCG TTTTCTCACT CCTTCCAGCG CTGGACACAC
CAACATGCTC GTCCTCTACG ATTACGACAG CAATGCCATT CACGTCGAGC TGATGAAGAG
CAAATCCGGT CCCGAGATCC TTGCGGCGTA CAAACGTGCA CACACGCTTT TCACCGAACG
CGGCCTCCGA CCTCAACTCC AACGCCTGGA CAACGAAGCC TCTGCAGCCC TCCAAACCTT
CATGACTTCC GAACATATCG ACTTTCAGCT TGCTCCCCCG CATCTGCACC GTCGCAATGC
AGCCGAACGG GCCATCCGCA CCTTCAAGAA CCACTTCATT GCTGGCCTCT GCAGCACTAA
CCCGGATTTC CCGCTCCACC TGTGGGACCG ACTCATTCCC CATGCCCTCC TTACCCTCAA
CTTACTCCGT AGCTCCCGCC TCAATCCCAA GTTATCGGCC CACGCTCAGC TCCACGGTGC
CTTCGATTAC AATCGCACTC CACTCGCTCC CCCTGGCACT CGCGTCCTCG TTCACGTTAA
GCCCGCCGTT CGCGAAACAT GGGCACCCCA TGCAGTCGAA GGTTGGTATC TCGGCCCAGC
TCTGCACCAT TATCGCTGCC ATCGCGTCTG GATCACCGAA ACACGGGCAG AACGTGTCGC
CAACACCCTT TCTTGGTTAC CTAGCCAGAT CCCCATGCCT ACCGCCTCAT CCAACGACCG
TGCCCTGGCC GCCGCCCGCG ATCTGGTCCA TGCGCTCCAA AATCCCTCCC CTGCTTCCCC
GTTTGCACCT CTCGACGCAC ACCAGCACCA GGCCCTCACC CACCTTGCCG ATCTCTTTGC
CACCATTGCC GCACCTGCCT CTGCCGCCCA GACACCTGCT CCCGTCCCCA CGGTCCGTCC
CCCTGACCTA CCCGCCACCC CACCTCAGGT CCGCTTTGCC GTCCCGCTGG TCACCGCTGC
ACACGCCCCT GCCCTTCCGA GGGTGCCAAC ACCCTCGCCC GCACTTCCGA GGGTGCCCAC
CATGGCCACC TATTGCTCTC GCACAGGTAA CCCCGGCCGC CGACGCCGCA CAGCACGCAA
ACAGCCACCA ACCCCAACCC TAG
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| Protein sequence | MSTSAQFKLS DFPHKVLEPI ATLTAPPTYA TLKVAQRQLS TNAAAIPTLN GGGAHGHMAL
TLTARAYADI SDVPFDIPVA PPANPPVGTT QPQITEFNRI HQRDADIYNL YVAVNNALRQ
QLLDAIPKIY VRALGHPIFE FSTVTCLDLL SHLWTKYGTI KPADLQNNLQ SMYTPWNTAE
PLETVFLQLD NAIAFSIDGN DPISEAAAVR AGYDVLAHSG LFPQDCKEWR KLPLVSHTLA
NFQAHFTLAD KDRRLTATTG SLGYANVLTA TPSLAPTISL DPLSLPFSAL SILNSSVVPS
PPSPHTSAIA DTGCTGHYIT VDCPHQNKQP ANPSLSVCVP NGSVLRSSHV ATLALPGFSP
TACQAHIFPG LASHPLLSIG QLCDDSCTAT FSATRLDIHR DQTLLLSGTR SRHTGLWHLD
LAPSPPPATA HALIPHSSLT DRIAFIHASL FSPALSTWCN AIDSGHLTTF PDITARQVCK
YPPASPAMIK GHLDQQRANL RSTKSPPIGP LAAPIAPTAT SAHDRPPVAR THHVFATHQR
VTGQIYTDQP GRFLTPSSAG HTNMLVLYDY DSNAIHVELM KSKSGPEILA AYKRAHTLFT
ERGLRPQLQR LDNEASAALQ TFMTSEHIDF QLAPPHLHRR NAAERAIRTF KNHFIAGLCS
TNPDFPLHLW DRLIPHALLT LNLLRSSRLN PKLSAHAQLH GAFDYNRTPL APPGTRVLVH
VKPAVRETWA PHAVEGWYLG PALHHYRCHR VWITETRAER VANTLSWLPS QIPMPTASSN
DRALAAARDL VHALQNPSPA SPFAPLDAHQ HQALTHLADL FATIAAPASA AQTPAPVPTV
RPPDLPATPP QVRFAVPLVT AAHAPALPRV PTPSPALPRV TPAADAAQHA NSHQPQP
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