| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47952 |
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| Symbol | |
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| ID | 7203137 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | + |
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| Start bp | 538325 |
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| End bp | 540069 |
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| Gene Length | 1745 bp |
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| Protein Length | 420 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182248 |
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| Protein GI | 219123888 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.870123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAAAGTACTT CCAGATTAAT GTTGCAGTTG GGCAATCCTG ACGTGTGAGT CGCGCGTTTC
TCCCTTCTTC TGGGCAGAGC AGCTTCCAGT AAAAATTTCC CTTCGAAAAC GTGAAACAGT
GTAGCCGACA GCGGGGTATT GACTACTTGA GACTGTTCAC TCTCCGTTCA CAAAATATTA
CTATCACAAC ACATTCCAAC TGTGCACTCC CAAGTTGCGT CTCTTTACGG AACAAGGTTG
ACTAGTGCTG TGGCATTTGT CATTGCGAAT CAGACAAAAT GTCGTGGTAT TTCGCAAGTC
TACCTTCGGC ATCGGATCGT TGCTTGGACG CCTCAACAAG ATCGACTCTT CATCAACTTC
TGAAAAACGA AGAAGAACTG AGCAGTTTTC AGCGTACTAG AGTATGTCCA GGAGATTGTC
AACGGAGACT TTTGGATAGT CTCATCACTC CTCCTTTCTT CTTTAGAGGC GAGGCACCAT
CTGGTCTCGG GGATTACAGC GACGTTCCGT TTCATCAGCT TCCCAGAACT TTTTTGGGAA
GTGAGCCAGC AATAGCTCCG GCTGAGATGC GCAGCCTGCG TTTTCCACTC CCGGCTAAGC
TCAACGCTAT TCTTTCCAAC CATGAAAATG AGCATATTGT TTCTTGGATG CCGCACGGAC
AAGCATGGCG AATTCATGAT CTTGATCGAT TCCGTGATCA GATTCTACCT GTTTATTTTG
ATTGCGGCTC ATGTGCTGGT AGCATCAATG CATTTTTGCG CCTTTTAAAG CTTTGGGGGT
TCCGTCAGCT CGCGCATGGA CCCGACATTT CCGCATTTTA TAACGAGGTA TGCCTGCTTC
ATAAAGTTTC CAAAAAATGC AATATTTGTG TTATCACAAC AATTGTACTA AGATTTTCTT
CCCTCTTCAA ACAGATGTTT CTTCGAGGCA TGCCGAATCT GCATAGACTG ATGCGCGCTT
TCGACAGCAA TATAAGGCAA TCTCTTTATA CCACCCCTGA GCCCAATCTA TCAGCTTTTC
CCGTGTTGCA ATACAACCAG CCTGCGTCTC GAATAGACCC GACTTCAAAC GCGCTACACT
CGCTCAAAAT GTCCCGAGAT CTTCACTTTC GCTCGCTGGT GCTATCTTCT ATGCTACTTT
CAAAGGGCGC GTTGTGCAAA AAGGGGTCAT CCGTTGTTTC TTCACAAAAG AGCAGAGCGT
CTTTTTGCAG CAATACCAAA GAGGAGACTT CAGACCTTGA TGGTTTAGAT TTAAATACTG
GCTTGCTTGC AGCACAGGAG CTTCACTTGA GCAGCATGGC GAACATGAAT CAAGATCGGC
AAGTTGATAA ATCCCAAGGC CTGGCTTCGG GTTTGGTTCG CATCGGATTC TGTGGTAGGA
AAGATTTTGC CGGTAGCCGT TTAGAGGACC CTGAAAAACT CCAGCCCACC AAGAATGGAA
CAGGGTCAGA ATCAGTCGTA TGCCCCGTCT CGTCCTCTTC AAACCTGATG ACAAGAAAAG
GGCGGAAAAG ATGGCTGCCT TCATTGGGCC CCAAGCAAAC ATTTTCTGGT CCCGATCCGG
GCTTATGCGA GTGGTTTTGT ACCAATCCAG AAGTGTTTGC TTCCTTGGCA GACTCGCCGC
AATCTTGATG AGAAAGGTGG ATGTGAGAAG GAGATACCCC GTGCATCATA ACAGTTGATG
AGATTTTCTT TTTGTTTTCA TTCCATTCAA AAATTGACAG TATTTTAAAG AAACGAATAT
AATGT
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| Protein sequence | MSWYFASLPS ASDRCLDAST RSTLHQLLKN EEELSSFQRT RVCPGDCQRR LLDSLITPPF
FFRGEAPSGL GDYSDVPFHQ LPRTFLGSEP AIAPAEMRSL RFPLPAKLNA ILSNHENEHI
VSWMPHGQAW RIHDLDRFRD QILPVYFDCG SCAGSINAFL RLLKLWGFRQ LAHGPDISAF
YNEMFLRGMP NLHRLMRAFD SNIRQSLYTT PEPNLSAFPV LQYNQPASRI DPTSNALHSL
KMSRDLHFRS LVLSSMLLSK GALCKKGSSV VSSQKSRASF CSNTKEETSD LDGLDLNTGL
LAAQELHLSS MANMNQDRQV DKSQGLASGL VRIGFCGRKD FAGSRLEDPE KLQPTKNGTG
SESVVCPVSS SSNLMTRKGR KRWLPSLGPK QTFSGPDPGL CEWFCTNPEV FASLADSPQS
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