Gene PHATRDRAFT_47938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47938 
Symbol 
ID7203190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp493962 
End bp494436 
Gene Length475 bp 
Protein Length149 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182402 
Protein GI219124210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.956108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACT CCACTTCGTT CACGCTCACA GTCAGTGACT TTCCTTACAA AGTCCTCGAT 
CCCATCGCCA CCCTCAGCGT TGCCCCGACC TACGCGACGA TCAAGCGAGC CCAACGCCAG
CTCAGCACCA ATGCCGCCTC CATCTTCTCG CTCAATGGAG GCGGAGCCCA TGGCCATTTA
GCCCTCACTG TCACCCCCGA AGCCTATTTG GAGATCACCG ATGTCCCGTT CATTGTTCCC
GTCGCGCCCC CTGCTGATCC GCTTCCTGGC GAAACCCTAC CGCAAATAAC GCAGAACAAC
CTTCTCCACC AGCGCGCGAA GGAAATCTAC GGCACGTATG TCTCCGTCAA CAATGCGCTC
CGCCGGCAGC TTCTTGACGC TGTTAGCCTC AACATAATTC CTTTGCCTTT TGTTTCAATG
GCCTACAATT TGACTAGCTC AAGGTCATAA TGTTTAGTTT GAAATTGCCG ACGCA
 
Protein sequence
MTNSTSFTLT VSDFPYKVLD PIATLSVAPT YATIKRAQRQ LSTNAASIFS LNGGGAHGHL 
ALTVTPEAYL EITDVPFIVP VAPPADPLPG ETLPQITQNN LLHQRAKEIY GTYVSVNNAL
RRQLLDAVSL NIIPLPFVSM AYNLTSSRS