Gene PHATRDRAFT_47937 details

Gene Information

• Locus tag: PHATRDRAFT_47937
• ID: 7203189
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 492908
• End bp: 493519
• Gene Length: 612 bp
• Protein Length: 175 aa
• GC content: 45%
• Product: predicted protein
• Protein accession: XP_002182238
• Protein GI: 219123868

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0256241
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTTTGACTAC GAACACAATC AGCAGCAAGC GACTTCCGAT TAAACTCTAT TTACTTATAT 
CGTACGAGAA GCCTTCCAAA TATGGCCGTC AATTTTCTCA CTATGGCGCT CATGCCTCTC 
TCCCAAGCTG CTTCCTGGAT GTTGATCCTC AAACAACGAC CATCACTTTT TGCTGCTGTG 
TGGAAAGTTG CATTATTTTA TTGTATTTGG GCGCTGTACA ACAAGTACTT TGCTGGAAAC 
GATTCCGAAC TTGGTCAATA TAGTATGGGT ATATTGGCAA TCGCGGCGTT TTTGCAACAC 
CGCGAGTTTT CGATATGTGG CAACGTTGTC GTGTTGCTGA ATTACTGCGT CGCCTTTTAC 
ATTGCCTTTT CCCGGTCCAT TCATGAACTT GCCATTGATG CAAAAGGATC CGACAATCTT 
AGCGCAATTA CCTGGGCTTA CATCTTTCGA GTCTATGTAC TGTCGAATCT AGCAATGTGG 
AGCATGGTCC TTTTGAAGTT CATCAAGTTA CCTTCCCAAA GCGTCTCTTC TTCTCGAGAG 
GCTTCTCAAA GCCTTCTCAA GACGCCTGTC AAGGCAGGGT ACCAACCTGT GGAAAACGTA 
CAAGCATGAA AA 

 

Protein sequence

MAVNFLTMAL MPLSQAASWM LILKQRPSLF AAVWKVALFY CIWALYNKYF AGNDSELGQY 
SMGILAIAAF LQHREFSICG NVVVLLNYCV AFYIAFSRSI HELAIDAKGS DNLSAITWAY 
IFRVYVLSNL AMWSMVLLKF IKLPSQSVSS SREASQSLLK TPVKAGYQPV ENVQA