| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47902 |
|---|
| Symbol | |
|---|
| ID | 7203109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011683 |
|---|
| Strand | + |
|---|
| Start bp | 391521 |
|---|
| End bp | 392363 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182215 |
|---|
| Protein GI | 219123820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.482005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCCATATCAA AGAGCAAATT TATTTGACTC GCTGTTCAAC CTTGATTTTC ATGTTAGACG
CCTTGGGGTC TGATAGTCGT TTGGACATGA AGAAAGATCA AGATCAAAGA GAGGAGATTC
CCGGTTCAAC ACCCGTGCCA TCGTCGCTAT TATCGACCTC TGCAGAACAA GCATCAATTG
ATACCATTGC CGGTTCGCTT GATTTTGACC TCTCAAATCA TGTTCGAGTC AGTAGACCAA
TTCTTCGTGT TTTGACTCAA GAAGAGTCAC TACAACTTTG CCATCTGAAG CACTCCAGCA
TGATCTCTTC CGCAAGGCCA CCGCACCATG TCAAATTCGA CACAGTGGAA ATTCGCGCTT
ACCCCATCAT ACTTGGATGC AACCCTGCGG TTACCAAAGG ACCGCCCTTG ACAATAAATT
GGGATCACTG CTGCGGAGTT ATAGAGCCGG TTGATGAGTA CGAAGCGAAG CGGCTGCCGC
GCAAGTCGGC AATACTACTT CGGAAGAGCA GCTTGGAGCG GCAGTCGCTA TTGAAAGAAG
AAGGATTCGG GTCCGATGAT TTTCGTATGG CGGAAGCCGC TGTGGATGAA ATAAAAAATC
GCGAGAGCTT TCCAAGCATG GAAAGTCTGA CCTATCTGCC ATGATTGCGG AAAGCAAAAG
GAAAAAGGCG CAGCACAAGG TCAAAAAGAC CGGAAATGGA TTTCTAGTGT TTTCTTTTTT
CAAAAGGAAC ACTTCTCGGC GAGCGTCTTC AGCGGCGAGT GCATGACAAC TTCGATGTAC
GAGGTTTCAG GATACACACT AGATTTTTTG ATGCATATAA ACTTCATAAT ATTGTTTGAT
GAG
|
|---|
| Protein sequence | MLDALGSDSR LDMKKDQDQR EEIPGSTPVP SSLLSTSAEQ ASIDTIAGSL DFDLSNHVRV
SRPILRVLTQ EESLQLCHLK HSSMISSARP PHHVKFDTVE IRAYPIILGC NPAVTKGPPL
TINWDHCCGV IEPVDEYEAK RLPRKSAILL RKSSLERQSL LKEEGFGSDD FRMAEAAVDE
IKNRESFPSM ESLTYLP
|
|---|
| |