Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47900 |
Symbol | |
ID | 7203166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 387589 |
End bp | 388494 |
Gene Length | 906 bp |
Protein Length | 196 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182383 |
Protein GI | 219124170 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.841912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGACAATCTG TACTGTGACT GAATCGTTCA TCATTCCACT GACAGTGAAT GCTAAAGCAA CACCCAGAAT TCCTCCTCTT TTAAGTGCCA GCGAGTTTTG CTTCGCGGAA TTGCTTCAAA TACGCATTAT CATCTACTCA AAATCATTGG CTGTGCAATC GCCAATTACG CTCAGAGCGT GATTACGATT ACCATTCTTT TCGATCAGCA TCTCGTTCAA TTTCACACAC TCTAACCATG GGAGGAAGAC GACGCGAGCG AATAACACGG TGTATCAGTG TTCTCCAGAC AGGGCAGCAT GATGTGGCTA CCAAGCCGAT CGATCCCGCC GTTGAGGAAC GGCATTTAAT CCTTTTTCAA AATTCTCCAC ACTACGAGTC GTCTTCCTCG TTGGCGCGAA GTGATTCGAC TACGACCACA GATCACATTC TCGATCGCAT ACAGTTCAAG AACGACAGAA AGACTGTTTC CTTCGCTAGC ATTGAGATTC GCAACTACAG CATTGTGTTT GGTGATCACC CCTACTGCAA CGATGGGTTA CCACTCAGTC TCGGTTGGGA CTTTGACGGA ATCAATCTAT TGTCGCTCGA CACGTACGAA GCAACTCGTG CGCCTCGCAG GAGTCGGCGG GAATTGCGCA TGAGTTGCGA AGAGCGTCGG CAGTTACTTT CTGAAGACGG AGTCTCCGAA GGCGAGATTC GCCGGGCGCA GCGCAAAATG CATCGTGCCC GAAGTTGCAG CGCGAAGCTT TGCGAGAAAA TGACCGAGTC TTTCTTTCGT GATGAGCCAA AACTGATACA AAGTCAACCT AATATGAGAA AGGAGTAGAA TCTGTGCATA TTCTTCCTCT TTTGGAGCTA TGAATTTATT GAACAAAGCA AACAAACGAT AAATTTTGTT GCACAT
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Protein sequence | MGGRRRERIT RCISVLQTGQ HDVATKPIDP AVEERHLILF QNSPHYESSS SLARSDSTTT TDHILDRIQF KNDRKTVSFA SIEIRNYSIV FGDHPYCNDG LPLSLGWDFD GINLLSLDTY EATRAPRRSR RELRMSCEER RQLLSEDGVS EGEIRRAQRK MHRARSCSAK LCEKMTESFF RDEPKLIQSQ PNMRKE
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