Gene PHATRDRAFT_47900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47900 
Symbol 
ID7203166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp387589 
End bp388494 
Gene Length906 bp 
Protein Length196 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182383 
Protein GI219124170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.841912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGACAATCTG TACTGTGACT GAATCGTTCA TCATTCCACT GACAGTGAAT GCTAAAGCAA 
CACCCAGAAT TCCTCCTCTT TTAAGTGCCA GCGAGTTTTG CTTCGCGGAA TTGCTTCAAA
TACGCATTAT CATCTACTCA AAATCATTGG CTGTGCAATC GCCAATTACG CTCAGAGCGT
GATTACGATT ACCATTCTTT TCGATCAGCA TCTCGTTCAA TTTCACACAC TCTAACCATG
GGAGGAAGAC GACGCGAGCG AATAACACGG TGTATCAGTG TTCTCCAGAC AGGGCAGCAT
GATGTGGCTA CCAAGCCGAT CGATCCCGCC GTTGAGGAAC GGCATTTAAT CCTTTTTCAA
AATTCTCCAC ACTACGAGTC GTCTTCCTCG TTGGCGCGAA GTGATTCGAC TACGACCACA
GATCACATTC TCGATCGCAT ACAGTTCAAG AACGACAGAA AGACTGTTTC CTTCGCTAGC
ATTGAGATTC GCAACTACAG CATTGTGTTT GGTGATCACC CCTACTGCAA CGATGGGTTA
CCACTCAGTC TCGGTTGGGA CTTTGACGGA ATCAATCTAT TGTCGCTCGA CACGTACGAA
GCAACTCGTG CGCCTCGCAG GAGTCGGCGG GAATTGCGCA TGAGTTGCGA AGAGCGTCGG
CAGTTACTTT CTGAAGACGG AGTCTCCGAA GGCGAGATTC GCCGGGCGCA GCGCAAAATG
CATCGTGCCC GAAGTTGCAG CGCGAAGCTT TGCGAGAAAA TGACCGAGTC TTTCTTTCGT
GATGAGCCAA AACTGATACA AAGTCAACCT AATATGAGAA AGGAGTAGAA TCTGTGCATA
TTCTTCCTCT TTTGGAGCTA TGAATTTATT GAACAAAGCA AACAAACGAT AAATTTTGTT
GCACAT
 
Protein sequence
MGGRRRERIT RCISVLQTGQ HDVATKPIDP AVEERHLILF QNSPHYESSS SLARSDSTTT 
TDHILDRIQF KNDRKTVSFA SIEIRNYSIV FGDHPYCNDG LPLSLGWDFD GINLLSLDTY
EATRAPRRSR RELRMSCEER RQLLSEDGVS EGEIRRAQRK MHRARSCSAK LCEKMTESFF
RDEPKLIQSQ PNMRKE