Gene PHATRDRAFT_47877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47877 
Symbol 
ID7203092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp313487 
End bp314491 
Gene Length1005 bp 
Protein Length257 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182368 
Protein GI219124139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.15469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGA ACGTAGAAGC AAGATCTGGA GTTGCTCAGC CGCAAGTATT TAAGTTTTGG 
AAAAGCTTGC GCTCTTCGCT TCGTTTGACC AAGACGGAAA ATGCGCATAC CTCTGCGAAT
GGTTTACCAG TTGACGATAC CCTTCATATG TACGAAGAAC CTTCAACAAA GGGAGCTTAT
TTGATTCCTT CGAAGACCAA GTATGCTCCG TCGAATGCCA TTAATCCTGC GCCGTCCGGT
GCATACGGCC ACGAAAATCT CGAAACGGCG GACGCAAAGG ACTCATCTGC TTGTGACACA
TCGACAGCAA CTAATCTGAA AAGTTCGTTT CGGCTGAACA ATTTGGCTAA GGCGCCATCG
AGCAAAGAAG TTGGTTGGTC TGACGTTGTT TTTCACTCGC ACGAAATAGT CCTTGGTGAC
AACCCTGCCG TGTCGTGTGG ACCTCCCGTT GCTGTTGGGT CTACCGAAGT AAGCACCGAC
ACTTTGTCAA TAGAAGAATA CGAAAATCAT CGAGGGCCGC GAAGGATTAA GGAGAGCTTG
CTGCTACCGC CATCACTTAG GGAAGATCTC CTACGGGAGG AGGGGTACTG CCGGAGTGAG
ATTCGCGATG TCGAGGCCGA TGTCAACAAA ATCAAAAAAT TCCGGAAAAA GAATGCACGC
GAAAACATTT TGAAACGAGT TCAACATTCA GCCTCACGAA ACCAGCGACA GCTACGGGTA
AAGGCTGCTG TAGACAATCA CGTTCACCAC GATGGTTGGC TAATATTTGT GTGAAGCGGC
GATTTTAATG TAGATGGCAG TTGTTAGTGT TAATGGTACG AGAGCTTTGT CGTTGAAACA
AAACGACTAC TCAACATTTG GTCCATAATG GGCGGTACTC GAGAGGAGGT TGGAGGAAAC
GACCGGCGTG AATACGCACA TGAATGATTC TACCGACACC AACATAAAAA AAGATCATGT
TCGTAGAGCA AATTTGCAAA TAGTGAAGCA CAATTTTGCA TTGTG
 
Protein sequence
MKQNVEARSG VAQPQVFKFW KSLRSSLRLT KTENAHTSAN GLPVDDTLHM YEEPSTKGAY 
LIPSKTKYAP SNAINPAPSG AYGHENLETA DAKDSSACDT STATNLKSSF RLNNLAKAPS
SKEVGWSDVV FHSHEIVLGD NPAVSCGPPV AVGSTEVSTD TLSIEEYENH RGPRRIKESL
LLPPSLREDL LREEGYCRSE IRDVEADVNK IKKFRKKNAR ENILKRVQHS ASRNQRQLRV
KAAVDNHVHH DGWLIFV