Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47877 |
Symbol | |
ID | 7203092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 313487 |
End bp | 314491 |
Gene Length | 1005 bp |
Protein Length | 257 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182368 |
Protein GI | 219124139 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.15469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGA ACGTAGAAGC AAGATCTGGA GTTGCTCAGC CGCAAGTATT TAAGTTTTGG AAAAGCTTGC GCTCTTCGCT TCGTTTGACC AAGACGGAAA ATGCGCATAC CTCTGCGAAT GGTTTACCAG TTGACGATAC CCTTCATATG TACGAAGAAC CTTCAACAAA GGGAGCTTAT TTGATTCCTT CGAAGACCAA GTATGCTCCG TCGAATGCCA TTAATCCTGC GCCGTCCGGT GCATACGGCC ACGAAAATCT CGAAACGGCG GACGCAAAGG ACTCATCTGC TTGTGACACA TCGACAGCAA CTAATCTGAA AAGTTCGTTT CGGCTGAACA ATTTGGCTAA GGCGCCATCG AGCAAAGAAG TTGGTTGGTC TGACGTTGTT TTTCACTCGC ACGAAATAGT CCTTGGTGAC AACCCTGCCG TGTCGTGTGG ACCTCCCGTT GCTGTTGGGT CTACCGAAGT AAGCACCGAC ACTTTGTCAA TAGAAGAATA CGAAAATCAT CGAGGGCCGC GAAGGATTAA GGAGAGCTTG CTGCTACCGC CATCACTTAG GGAAGATCTC CTACGGGAGG AGGGGTACTG CCGGAGTGAG ATTCGCGATG TCGAGGCCGA TGTCAACAAA ATCAAAAAAT TCCGGAAAAA GAATGCACGC GAAAACATTT TGAAACGAGT TCAACATTCA GCCTCACGAA ACCAGCGACA GCTACGGGTA AAGGCTGCTG TAGACAATCA CGTTCACCAC GATGGTTGGC TAATATTTGT GTGAAGCGGC GATTTTAATG TAGATGGCAG TTGTTAGTGT TAATGGTACG AGAGCTTTGT CGTTGAAACA AAACGACTAC TCAACATTTG GTCCATAATG GGCGGTACTC GAGAGGAGGT TGGAGGAAAC GACCGGCGTG AATACGCACA TGAATGATTC TACCGACACC AACATAAAAA AAGATCATGT TCGTAGAGCA AATTTGCAAA TAGTGAAGCA CAATTTTGCA TTGTG
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Protein sequence | MKQNVEARSG VAQPQVFKFW KSLRSSLRLT KTENAHTSAN GLPVDDTLHM YEEPSTKGAY LIPSKTKYAP SNAINPAPSG AYGHENLETA DAKDSSACDT STATNLKSSF RLNNLAKAPS SKEVGWSDVV FHSHEIVLGD NPAVSCGPPV AVGSTEVSTD TLSIEEYENH RGPRRIKESL LLPPSLREDL LREEGYCRSE IRDVEADVNK IKKFRKKNAR ENILKRVQHS ASRNQRQLRV KAAVDNHVHH DGWLIFV
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