Gene PHATRDRAFT_47876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47876 
Symbol 
ID7203091 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand- 
Start bp311755 
End bp312423 
Gene Length669 bp 
Protein Length159 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182367 
Protein GI219124136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.154799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAAATCAAT CCATCGTACG CCTCCATTGC CTATATCGAC CCTCCACAAC ATAGCCACGT 
GAACATTGTT CTACCGTGGT ATACGGAAAA AGTATGGCCA AGAGCATACT GAAGATAGAG 
GGGGAAGTTG AACACGCCAG AAATGTTAGC CCGCTTTTGA AGAGGGTTTG CTGGGGGGAT 
CTCGAGATTC TCGAGTTCCC CAATATGTTG GGAGACAATC CAGGCGTCTC GGAAGGGGCA 
CCGCTGACCA TCAACTGGCA ACACGAAAGT AGGGAGGTTG TGGCAATCGA GTATTACGAA 
TACTTACGAC AAAACCGTCC ACGGCGGCGG CGGAAAGATC TGGTTATGAA CAGTGCCTCG 
AGAGACACCT AGTAAGTTGA CAAATCCTTA GCCTCGGTAG CAACCAGCTC TGTCTTCAGC 
CCGTGAGTAG CTCACCTGAA TGTCTCTCTT GCTCTTTTTC TCTCTAGTCT GCTAGGACTT 
GGTTACAGGC TGGATGAACT AATTAAAGCA GCGGAAGAAA CAAAGAAAAT TCGCAAGAGT 
AGGCAGGCGA ACATGAAGGG CAAACTTGTA GACAAGTTTC GTGGACTTTT TGATTTCTCT 
TCCGTGGGCA ACTCCAAAGT GAAAAAGAGC GACGCGCAGC CAAAAATAGT AGCCGGGAAA 
TCCGCCTAG
 
Protein sequence
MAKSILKIEG EVEHARNVSP LLKRVCWGDL EILEFPNMLG DNPGVSEGAP LTINWQHESR 
EVVAIEYYEY LRQNRPRRRR KDLVMNSASR DTYLLGLGYR LDELIKAAEE TKKIRKSRQA 
NMKGKLVDKF RGLFDFSSVG NSKVKKSDAQ PKIVAGKSA