Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47870 |
Symbol | |
ID | 7203149 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 298764 |
End bp | 300273 |
Gene Length | 1510 bp |
Protein Length | 402 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182363 |
Protein GI | 219124128 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.504417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCGGTCTTGG TCGTCCGTAC AATCTAGTAG TTCGCTGCAT AAAGCAAGCT CGTGACCTTC AAAGGATTTT GTCTTTCAGC CCAAGCAAAC AGCATAGGAT AGGATAACTC CCATGGCAGC AAACGGTGGA AGCAGGCCGA ACTTTGCCGC TATGGAAATG GAAAGCAACG GTAGGTCGTC TCGGCGCGAC ATGAAACCCA TGCCGGTTCA ATCTTCTTCC GGTTCGACGA GTCATCCACT AGATCAGCTA TGTATGTTCC TAAAGCTGCA TTTGGAGTAC TATCCGCGCC TTGCGACAGC TCTAGTCCTA TCCATCATCG GACTACTTTT CTACATGTTC GTAAAGTCTT TTCAAACGCC TATGTATAGG AACCGACTCT CGCACGATTA TACCAAAATC GAATTGGACT ACAACTTCAA AGCATCGCAG TTAGATCATT GGTGTTTGTT TGTAAGTTGA TAAATGGAGG GACGAAAAGG TAGGTCGTGA AAGGTCTCCT TAATCTTGCT GACCCATTTT CTCTCGATTT TCAGGGTGGA GACGACGCCT GTCAATGCGA AGACTTTACC GAAACGATCT CGCGAGAGGA ACAACAAGGC TGGCTACCCG CTCATGAAGC CAACAAAAAA CGTATTCAAC AAAATGTTGA CTACGATGTG GTTTTCTTTG GGGACGAGAC GACGGAAGAA TGGAACGGCT ACTGGTATAA CAAACCAAGC CAGGATGGCC ACTTAATTCG CAAATACTGG AATGAAACCT TTACCAGCGC CGGTGGAGGT GAATTGGAAG GTCTGGCCTT GGGTATTGCC GGTGATTCAA CAGCCAATTT ATTGTGGAGA ATGCAACACG GCGAACTGCC GCAGTCGCTG AACTCCAAGG TTTTCTGGCT ACTTATTGGA ACAAACGATT TATCCCGGGG TGGCTGCTCT GAAGAAGCGA CTGTCTTGGG TATTCTCCGG ACGGTAGAAG AGATTGCCTT CAGCAACCCC GGTTCGGTGG TGGTCATTCA GGGCATTTTG CCACGATCGT CGCGGCAAAA TGGGAGCCTG GAGAAAGTTG GAGGTCGAGC GCATCATCTC TTTGAATGGC ATCATTCAGA GACTTTTAAG GCTAATCAGG CTCGCCGCCA CTTCTTACTC TGGCCTTCTA TTCAGAAAAT CAATCAGCAA TTGGCTACAT TCTGCAAAGA ACACGACCAC CTAGTTTACT TCGATGTCGA CTCGTTGTTT CTGGGAACCC TGGGCAACGA CCACTATACG GCAAAGTCGC AACAGATTGT TTCGGATCTT ATGCCGGACT ATGTTCATCT TTCGGTGGAG GGACACCGAG TCCTGGGGAA TGCCATTTTG CGTGAGCTAC AGCGGATCAT CTTCGAAGAT GACGAACGCA ACGATGTCGA ATAAGTTGAT GATGAGAAGG TTTGCAGTCG TATTTTAGTG TTCTTCTATG GGAGAAGAAT ATGCTTTTTG TATCATACAT AGTTGTTCCG TAGACCGCCT TTCTGTTAAT
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Protein sequence | MAANGGSRPN FAAMEMESNG RSSRRDMKPM PVQSSSGSTS HPLDQLCMFL KLHLEYYPRL ATALVLSIIG LLFYMFVKSF QTPMYRNRLS HDYTKIELDY NFKASQLDHW CLFGGDDACQ CEDFTETISR EEQQGWLPAH EANKKRIQQN VDYDVVFFGD ETTEEWNGYW YNKPSQDGHL IRKYWNETFT SAGGGELEGL ALGIAGDSTA NLLWRMQHGE LPQSLNSKVF WLLIGTNDLS RGGCSEEATV LGILRTVEEI AFSNPGSVVV IQGILPRSSR QNGSLEKVGG RAHHLFEWHH SETFKANQAR RHFLLWPSIQ KINQQLATFC KEHDHLVYFD VDSLFLGTLG NDHYTAKSQQ IVSDLMPDYV HLSVEGHRVL GNAILRELQR IIFEDDERND VE
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