| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47846 |
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| Symbol | |
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| ID | 7202980 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | - |
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| Start bp | 223564 |
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| End bp | 226157 |
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| Gene Length | 2594 bp |
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| Protein Length | 770 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182349 |
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| Protein GI | 219124099 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCCG AACAACCCCG TGCCGATCCG AATCCGTTCG GAGGAATATG GAGCTGGTCC
TGCGCACCCT TCGCATCACG TGCCAAGGAA TTGGTACCGA GAAGGAAAAG GACGCCTCGG
CCTTCGCCAC GAAATCTGTA CCCATCGCAC CCCCAACATT GTGTGCTCAA CCGGAATTGG
CGTACGTGAC CTTTCCCGTG GACATTCTTT CCACCCAAAA GCTGTTGACG ATATTGTCAT
GAAAGATCGC GAATCGGACA GCGAAGGAGA AACCGCTGCC CCCGCAAGCA ACCACGCTCC
CGAGGCGATA ACGGCGACGC CACCAGCGCC CTACGGCAGC GATGACGTAC CTAGTTCGTA
TCAACACAGT AGTCGTCTAG CACATAGAGG CGTATCCACG CCTTCGACAT CAAGCTCCAG
AGATTCGTCC AAATTTGCGA AAGAAATATC GGTGTCCCGA ACCCCGACGA ATTTCCACGA
ACAAACGATT CCTATACATT CTACATCTCT CAACACTCTT GAAGACGACG ACGACAACGA
TGAGACTTCG TCCACGAGAA GTTCGTCTTC TCGTCGTTAC GATTGGCGGG TCTTCCGTCC
CCGAGACGGC GGATGGGTGC ACTTTCTGCG ATGGTTTGTG GTGGGCGGCG CCTCGTACGC
CAAGAAAACA GACGACAAGT TACAAGAAGA TTTAGGCAAA CTCGCGCGTT GTTTAATCCT
TCTCCGCGAG TATCTCTCCA CCTTTGGTAT GCCCGCCAAG GGGGGACCAA TGGATCAAGA
GGTTGTCCTC CGGCAGGTAC TGCGAGATTT GTACGCTGGC GGGGCGCCGT TGTGGGCTGT
CGAACCCGTC ATGCAAAAGG CAGCGGAAGG CTTAACCGGC ACTCCCGGGA TTAACTGGTT
CCTTTTACCC CGCAAGGCCT TTTATAGCTC CACATCCACT ATCACATCTA CCATGTTCAC
CATCGAACGG GGGTTCAACG TGCAAAAGCT GGGGGCCATG GAAAAGGTAG CCATTCGACT
GGCCTCGTTC GCGAGCAACA CTAAGGGTGT AAGTAACATT CCGGAACGCT TTCCGGAACC
GAGTGAACTA CAGAAGGCGG CTCGGATGGA ATCAGTGCGC TTTGACGAGT CCTTTCGAAC
GGGTGGGACC GTCCTGAAGA GTCAGGATCC CAGCGTGGTG GCTAAAAAGA TACTCAGACT
AGCCTCACAT GCGGAAGGAC TGTTTTACTT TGTCAATGCT CGGGAATATT CCGAAATGCC
GGGGCAACGG ATGAATGATT TTTGGGTAGT AACGGAACAG GAACGAGAGC TCTTCAGCCG
ATTGGCAACC ATCGAAGCGA TGCAGATGAT TAAAGAGATC GACGCCAATT GCGGAAAAGA
AACGTATTCA TACTGGACAA TTTCACTTTT TCGAGTAATG GCTTCCGCTG GAGCTTGTGC
CTTTTGGTTT GGTGGCTCGT GGGTAGACAT GGCCGTATCT GGAGTGTTGG CGCTGGTAGT
TGCCTTCATT GGACAGTCAA AATTTCTATC ACAGCAAGAA CGACTGGTAT TTGAAATTGT
TGCAAGTTTC GTAGTGGGCA TTACAGCGGG AACTATTGCT TTGAAATGGC CGGACGATAC
TTGTTTTGGA GCCATGGCAA TTGCCGGTGT TCTGGACCTT CTGCAAGGTT TCCGCGTAGT
CTACGCGGTC ATTGAAATCA TGAGCAAGCA AACCGTTTCT GGGGGCGCCG ATTTGATGGA
GGGTATTCTC TTTACTGGAT TAATTTCGTG TAAGCAGAAA GTCGACGTGC CTGTCAGTCA
ATCAACAACA TTGTCTCATT CTTTTTATCT GTTCTATGCA ATAGCATCCC TTCGATTCGG
GCAGTATACG GCGGCATCTG TCTTCTCTGA CACAGCGGAT AATATTGGCT TTGCAGCTTG
CGAGCATGGT ATCGATCAGC GCTGGTTCAT TTTAATTGTC CCAATAGCTG CAGTCTCTTG
GTCGGGACTC TTCAATCCGA GGTATCACGA TCTTCCAATG GTAAGTAGTG GTAGTACATA
GGCTTGGGAT TGCGCAGATT GGATGCACAG CAGCCTCTCA ATTTAAGTGA TTTTCTTTGT
CGGTTTTCGT AGATGGCTTT CCATGGTTCG TTGGCATACT TGGTGAACTT TGGACTAGCC
CAGTTCAACG CAGCCGATAA CTTGAATAAT TTCGTATCGT CCTTTGCGGT TTCCTTCTCC
GCCGGAATTT TTTCTCGTTT TACTGGTCAT CAAGCCGTTG GAAACACAGT CGCCGGAATG
TACGCTTTAG TGCCTGGAGC ATATCTCGTA ACTTCGTTGT TTTCTACCGA CACTTTGGAT
ACTAGTTTCT TTGTTGAAAT CATTCAGCGT TCACTCATTA TTGGTATTGG TGCCTGGTCT
GGAACAATTC TCTGTTCGGT AAGTTTTAAT ATGATTTTGT GGCGTCCCGA AGCCATAGAC
GCTGACGTAT CTCTCCTGAA TACTTTATGT AGCCTGCACT CCTTGGAACG ACGATGGGTC
TCATTTCGCA GCAGCACCGG GATCATAATA GGCGAGGCTC CTCGACGACA GGAAATGCCA
TGCTTTTCTT CTAG
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| Protein sequence | MSPEQPRADP NPFGGIWSWS CAPFASRAKE LVPRRKRTPR PSPRNLYPSH PQHCVLNRNW
PVDDIVMKDR ESDSEGETAA PASNHAPEAI TATPPAPYGS DDVPSSYQHS SRLAHRGVST
PSTSSSRDSS KFAKEISVSR TPTNFHEQTI PIHSTSLNTL EDDDDNDETS STRSSSSRRY
DWRVFRPRDG GWVHFLRWFV VGGASYAKKT DDKLQEDLGK LARCLILLRE YLSTFGMPAK
GGPMDQEVVL RQVLRDLYAG GAPLWAVEPV MQKAAEGLTG TPGINWFLLP RKAFYSSTST
ITSTMFTIER GFNVQKLGAM EKVAIRLASF ASNTKGVSNI PERFPEPSEL QKAARMESVR
FDESFRTGGT VLKSQDPSVV AKKILRLASH AEGLFYFVNA REYSEMPGQR MNDFWVVTEQ
ERELFSRLAT IEAMQMIKEI DANCGKETYS YWTISLFRVM ASAGACAFWF GGSWVDMAVS
GVLALVVAFI GQSKFLSQQE RLVFEIVASF VVGITAGTIA LKWPDDTCFG AMAIAGVLDL
LQGFRVVYAV IEIMSKQTVS GGADLMEGIL FTGLISSSLR FGQYTAASVF SDTADNIGFA
ACEHGIDQRW FILIVPIAAV SWSGLFNPRY HDLPMMAFHG SLAYLVNFGL AQFNAADNLN
NFVSSFAVSF SAGIFSRFTG HQAVGNTVAG MYALVPGAYL VTSLFSTDTL DTSFFVEIIQ
RSLIIGIGAW SGTILCSPAL LGTTMGLISQ QHRDHNRRGS STTGNAMLFF
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