Gene PHATRDRAFT_47835 details

Gene Information

• Locus tag: PHATRDRAFT_47835
• Symbol: Atp1
• ID: 7202973
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 196002
• End bp: 198115
• Gene Length: 2114 bp
• Protein Length: 544 aa
• GC content: 53%
• Product: synthase of mitochondrial ATP synthase
• Protein accession: XP_002182174
• Protein GI: 219123734

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACTGCGTGC TGACTTTTTC CTTAACAATG GTGCTTCGTA CAGCTCTCGT TTCCGCTGGA 
AAGCGCATGG CCATGGCGGC TGCAAGCCAG GTATGTTTGT TTGAATGGAA CGGAAAATAG 
AATTTGGTGA AAACGGTCGT GCGTTGCGAA CGTCATGGTC GAGTCGTTAC GTCACGGTCA 
GCCGATCCAG CAACCCGCCG ATGGACTCAA AATTGCAGGG AGCGTTGATC AAGTCACGCG 
GATCCCTTTC TGTCTTCCTT TTGACGCCAC GGTTTCCTCC TTTCGCTCCT AGTATCGTCG 
CATGGCAAGA TTGGTCCCGT TGGTCTTGTT TTAAGGCCTA GTCGATGAAT CTGGAGCGCC 
ATTCCGTTTC CTCCTTCTTT TTTGTCCTTT GCTAGATTTA GAATTCCAGA TTCCTTATGT 
TGCGTTTTGG GTGTCGAACC CTCTTTTCCT TCTGGCGCTC ACAACTTTCT TTGTTGACGT 
TAGGCGGCTC GCCGAAGTGC CCTCCAGGCC ACTGCCTCCC GTGGTATGGC TAGCCAGACC 
CTTGAGCTCT CGACCTACCT CGAGAGTAAG ATTGGTGCCC TGGCTGGCGC GGAAGACTCG 
GGAAAGAAGT ACGCCGAAAC TGGATCCGTC ATTTCCGTAG GAGATGGTAT CGCTCGTGTG 
TACGGCCTCT CCAATGTCCA GGCCGGAGAG ATGGTTGTCT TTTCCGCGGG TCTCCGTGGA 
ATGGCTCTCA ACTTGGAAGA AGACAATGTC GGGGTCGTTA TCTTTGGTGA CGATCGGGAC 
ATTCTCGAAG GTGATACCGT CAAGCGAACA GGTGCTATTG TCGACGTTCC CGTTGGTAAC 
GAACTTCTTG GACGCGTGGT GGATGGTATT GGACAGCCCA TTGATGGTGG TGCTAGTCTC 
GAAAAGTGCA AGCGCTCTCG TGCCGAAGTC AAAGCCCCCG GTATCATCCC CAGAGAGTCC 
GTGTCCGAAC CCATGCTTAC CGGTCTCAAG GCCGTCGATG CCTTGATCCC TATTGGACGT 
GGACAGCGTG AACTGATCAT TGGAGATCGC CAAACTGGAA AGACAGCCAT TGCTATTGAT 
ACCATTATTA ATCAGAAGAC CAAAGCCGAG CCGCTGGCGT GCATTTACGT TGGTGTCGGG 
CAGAAGCGAT CCACTATTGC TCAGCTCGTC GGACAGCTCG ACGAGCGTGG AGCCATGGAC 
AACTGTATCA TTGTCGCTGC CACCGCTTCC GATGCCGCTC CTTTGCAGTT TTTGGCGCCT 
TACACGGGTG CTGCCATGGG TGAATTCTTC CGCGATAATG GCAAACACGC CGTGATTTTC 
TACGATGATC TTTCCAAGCA AGCTGTCGCC TACCGTCAAA TGTCTCTCTT ACTCCGTCGT 
CCCCCCGGTC GCGAAGCCTA CCCTGGTGAT GTTTTCTACC TCCATTCTCG TCTCCTCGAA 
CGTGCCGCCA AGATGCACCG CAACAATGGT GGAGGTTCAT TGACCGCCCT TCCCGTTATT 
GAGACTCAGG CTGGAGACGT GTCCGCCTAT ATTCCGACTA ACGTGATTTC CATTACGGAT 
GGTCAGATTT TCTTGGAGTC CGAACTGTTC TACCAAGGTC AGCGCCCCGC CATTTCTGTC 
GGTCTTTCCG TGTCACGTGT CGGTTCCGCC GCACAGTACA AGGCCACAAA GGCGGTTGCC 
GGTACCATGA AACTGGAACT CGCTCAGTAT CGTGAGGTTG CGGCGTTTGC CAAGTTCGGT 
TCCGATTTGG ACCCCGCCAC TCAACAGCAG CTCAACCGCG GAGTCCGTTT GTACGAACTC 
CTCAAGCAAG GACAATACCA GCCCTACGAA CCGGAGGAAG TTGTGGCCGC CCTGTTCATT 
GGTGTTAAAG GATACTGCGA TCGCATTGAC GTTGAACACG TCCAGGGATT TGAAGTTGCC 
TTCCTCGCGC ATGTCAAGGG TGTCCACTCC AAGGTTTTGG CGGACATTGT GTCTGCCGGA 
TACGTGCTCA CCGAAGATGC CGAGAAGAAG ATGCACGAAA TTGCCGAGGC CTTTACCAGT 
GGATACTCTC CTTAAACAAC TGATTTACTG TTAGTAGTAT CAATAACCCA ACGCTGTGGT 
TTCAACATAT TTTG 

 

Protein sequence

MVLRTALVSA GKRMAMAAAS QAARRSALQA TASRGMASQT LELSTYLESK IGALAGAEDS 
GKKYAETGSV ISVGDGIARV YGLSNVQAGE MVVFSAGLRG MALNLEEDNV GVVIFGDDRD 
ILEGDTVKRT GAIVDVPVGN ELLGRVVDGI GQPIDGGASL EKCKRSRAEV KAPGIIPRES 
VSEPMLTGLK AVDALIPIGR GQRELIIGDR QTGKTAIAID TIINQKTKAE PLACIYVGVG 
QKRSTIAQLV GQLDERGAMD NCIIVAATAS DAAPLQFLAP YTGAAMGEFF RDNGKHAVIF 
YDDLSKQAVA YRQMSLLLRR PPGREAYPGD VFYLHSRLLE RAAKMHRNNG GGSLTALPVI 
ETQAGDVSAY IPTNVISITD GQIFLESELF YQGQRPAISV GLSVSRVGSA AQYKATKAVA 
GTMKLELAQY REVAAFAKFG SDLDPATQQQ LNRGVRLYEL LKQGQYQPYE PEEVVAALFI 
GVKGYCDRID VEHVQGFEVA FLAHVKGVHS KVLADIVSAG YVLTEDAEKK MHEIAEAFTS 
GYSP