Gene PHATRDRAFT_47823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47823 
Symbol 
ID7203063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand+ 
Start bp165805 
End bp166566 
Gene Length762 bp 
Protein Length219 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182167 
Protein GI219123720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTCCTCCTC GTTTGTGGAT ACTGACAGTG TACTGCATTC ATCCATCCAT CCATCCACCC 
TCGGTTACGG TATCCTTCTA CCGGAATCCC CACATTATCA CCATGGAAGC TCCTCAAGAA 
CGCAAAAGAT CGTCCCGATC GAAAAAGAAC AGGAACAAGA GCAAGAAAAA CAGCAAGAGT 
GCCAGCGTCA GCAACAATCC CAACATTAGC AAGAGTGCCA GCATCAACAA CACCCCCAAC 
CCCAGCGCCA GTAATACCCC CGGTCCCAGC ATTGCTAGCA TCCCCAGCCC CAGCATCGCC 
AACACCCCCA GCCCCAGTAT CACTGACACC CCCAACCCCA GTATCAGTAT CACCCCCAAC 
GCCAGCGATA GTAACAACCC CGGCCCCAGC GTCACCAACA GTCCCAGCAG CAGCCAGGGC 
ATCAGCAAGA GCAGCAGCAA GAGTGGTAGC AAGAGCAGTA GCAAGAACAG CAGCAGCAAA 
TCGAACAAGA AGATCAAAAA GTCCGGTGTC CGCACCAAGT TTCTGATTGA ATCGCTGCGC 
AACGAGTACT ATTCCCTACG CGAAGAGAAC GACCGCCTCC GCGGTCTCGT GACGGGCAAC 
CTGCCCGGAC CAGCCGCCGA ATCCATTCTG GCGACCTGCT TCGACGTGAA CGCTCCTCGT 
GCGCAGTTGG ACAACATTGA CGAACTGGCT TCGAAAGTGT CCGGCTCGAA TCTTGAAGAC 
GACGACGATG AAGACGAAGA AAACGAAGCG GTTGGCTTTT GA
 
Protein sequence
MEAPQERKRS SRSKKNRNKS KKNSKSASVS NNPNISKSAS INNTPNPSAS NTPGPSIASI 
PSPSIANTPS PSITDTPNPS ISITPNASDS NNPGPSVTNS PSSSQGISKS SSKSGSKSSS 
KNSSSKSNKK IKKSGVRTKF LIESLRNEYY SLREENDRLR GLVTGNLPGP AAESILATCF 
DVNAPRAQLD NIDELASKVS GSNLEDDDDE DEENEAVGF