Gene PHATRDRAFT_47790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47790 
Symbol 
ID7202949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp42553 
End bp43401 
Gene Length849 bp 
Protein Length254 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182311 
Protein GI219124020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.889285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTCTCTTGA TGCCCAGCTC TCCTCCCGAT CATCGGAACG TTGCTGAAAT TGAAATTGAA 
ATAGAAAAGC CGTAATAGTA GTCCATGAAG CAAAGCGTCG ATGATGAACA AGCCGACAAT
TCTTCAGCAA TTCCACTTTC CGACAAGCAG ATGAAACGGA TTGCTTCGCG CAATCGCAAG
AAAGAACTGC GGAAAGTGAA TAAACTCAAA AAGAAGCTGG CGAGACACGC CAAAGCAATA
GCTGAGGGAA GGAACTTAGA GGAAGAACGA TGTCAGCAAG CATTGCGAAC GTTGAGTGGT
GACGGGAAGA GAAGACGGGA ACAAGAATGG TTAGCAAAAG AGTCCCAGGC GAGGTCGTCG
TTTGAAGTTT GCATCGATTG TGATTTTGAA GCAGACATGT GTTCAAAAGA AATCAACAGC
TTGGCAACCC AAATCCGCTA CTGCTACTCG ATAAACAAAC GAACACAGCA TCCCTCGTAC
GTTGCTGTCA CAAGTTTGGG TGGTGTGACA TTAAGCAACC TTTCCAATGT GACTGGTTTC
AGCGAATGGA AAAGTAGAGG GTTCTATACA ATTGGGAAGC CGCTGGCAGA GCACTTCGAA
GGCAAATTAG AGAGGCTAGT CTATCTCACA AGCGACTCAG ACAATTCTCT CGAAGACTTG
GATGACGACA GCATCTACGT AATCGGTGGA ATCGTGGACC GCAATCGGTT GAAATATGCA
ACGCTGCATC GTGCCGAAAA AAAGAATGAG AACAGCCAAA CTACCCTTAG ACGATCACTG
CAAGTCAATA CAAGGCACTC GAATATTGAC CGTCAACCAC GTTTTCGACA TCTTGATCAA
ATATCGTGA
 
Protein sequence
MKQSVDDEQA DNSSAIPLSD KQMKRIASRN RKKELRKVNK LKKKLARHAK AIAEGRNLEE 
ERCQQALRTL SGDGKRRREQ EWLAKESQAR SSFEVCIDCD FEADMCSKEI NSLATQIRYC
YSINKRTQHP SYVAVTSLGG VTLSNLSNVT GFSEWKSRGF YTIGKPLAEH FEGKLERLVY
LTSDSDNSLE DLDDDSIYVI GGIVDRNRLK YATLHRAEKK NENSQTTLRR SLQVNTRHSN
IDRQPRFRHL DQIS