Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47790 |
Symbol | |
ID | 7202949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 42553 |
End bp | 43401 |
Gene Length | 849 bp |
Protein Length | 254 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182311 |
Protein GI | 219124020 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.889285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGTCTCTTGA TGCCCAGCTC TCCTCCCGAT CATCGGAACG TTGCTGAAAT TGAAATTGAA ATAGAAAAGC CGTAATAGTA GTCCATGAAG CAAAGCGTCG ATGATGAACA AGCCGACAAT TCTTCAGCAA TTCCACTTTC CGACAAGCAG ATGAAACGGA TTGCTTCGCG CAATCGCAAG AAAGAACTGC GGAAAGTGAA TAAACTCAAA AAGAAGCTGG CGAGACACGC CAAAGCAATA GCTGAGGGAA GGAACTTAGA GGAAGAACGA TGTCAGCAAG CATTGCGAAC GTTGAGTGGT GACGGGAAGA GAAGACGGGA ACAAGAATGG TTAGCAAAAG AGTCCCAGGC GAGGTCGTCG TTTGAAGTTT GCATCGATTG TGATTTTGAA GCAGACATGT GTTCAAAAGA AATCAACAGC TTGGCAACCC AAATCCGCTA CTGCTACTCG ATAAACAAAC GAACACAGCA TCCCTCGTAC GTTGCTGTCA CAAGTTTGGG TGGTGTGACA TTAAGCAACC TTTCCAATGT GACTGGTTTC AGCGAATGGA AAAGTAGAGG GTTCTATACA ATTGGGAAGC CGCTGGCAGA GCACTTCGAA GGCAAATTAG AGAGGCTAGT CTATCTCACA AGCGACTCAG ACAATTCTCT CGAAGACTTG GATGACGACA GCATCTACGT AATCGGTGGA ATCGTGGACC GCAATCGGTT GAAATATGCA ACGCTGCATC GTGCCGAAAA AAAGAATGAG AACAGCCAAA CTACCCTTAG ACGATCACTG CAAGTCAATA CAAGGCACTC GAATATTGAC CGTCAACCAC GTTTTCGACA TCTTGATCAA ATATCGTGA
|
Protein sequence | MKQSVDDEQA DNSSAIPLSD KQMKRIASRN RKKELRKVNK LKKKLARHAK AIAEGRNLEE ERCQQALRTL SGDGKRRREQ EWLAKESQAR SSFEVCIDCD FEADMCSKEI NSLATQIRYC YSINKRTQHP SYVAVTSLGG VTLSNLSNVT GFSEWKSRGF YTIGKPLAEH FEGKLERLVY LTSDSDNSLE DLDDDSIYVI GGIVDRNRLK YATLHRAEKK NENSQTTLRR SLQVNTRHSN IDRQPRFRHL DQIS
|
| |