Gene PHATRDRAFT_38362 details

Gene Information

• Locus tag: PHATRDRAFT_38362
• ID: 7203240
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 714479
• End bp: 716725
• Gene Length: 2247 bp
• Protein Length: 581 aa
• GC content: 57%
• Product: 2-isopropylmalate synthase
• Protein accession: XP_002182282
• Protein GI: 219123959

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGATCC ATCGGCACGT CCGCGGTGTC CAATCTCTAT CCGCTCAACC CGGACACACC 
CGGTGCTAAC CTGGTGTTAA CCTTGCCGAC GTTGGTGTTT CCGCCACCAC GCCCGACCAC 
TCGACCCCCC ACGGGAATTC CAACGAGGCC TGGATCCGGG ACGGGGTCGA ACAACAATCG 
ATCACAACCT TGTTCCAATC CGCCGTCGTG GGACCCGCTC AGGTACTCGT CTACGATACG 
ACGCTCCGAG GTAAGAGTAT CGATACCCCC AACGTGTCAC ACGCAACGCG CACCACACAC 
CTTACGGGTG TTGTTGGTAG CGATCCTTCC GTGCTCACCC ATGATCTAAC CCCCATTTCA 
CACTCATGTA ATATTTCACT AACTTACTTG CACTTTCGTT AGACGGCACA CAGGGTGAAT 
CCGTTTCGGC TTCGGTCGAC GACAAGTTGA AGATTACACG TCGACTGGTA GCCTTTGGGG 
TAGACTTTGT CGAAGCCGGT TGGCCCGGCA GCAATCCCAA AGACGCCGCA TTCTTTACCC 
GCGCCAAGAC CGACTTGACG CACGCGGAAC GCGACAAACT CGTCGCCTTT GGCTCCACCC 
GACGTAAACG AGTCCGCGCC AACGAAGATC CCCAGGTACA AGCCTTGCTC GAATCACAGG 
CTCCCACCGT ATGCATCGTC GCCAAGGCAC ACGCCTGGCA AGTTACCGAA ATACTCCGAG 
CCACACTCGA CGAGAATCTG GACATGATAC GGGACACGGT AGCCTGCTTG GTGGCACACG 
GTAGAGTCGT CATGGTCGAT CTTGAACACG CCCTCGACGG ATACGCCACC GATCCGGACT 
ACGTCCACGC CTGTTGTCGA GCCGCCGTGG ACGGCGGCGC CTCCGTACTC GTCGCCTGCG 
ATACCAACGG TGGTACCATG CCCTGGCGGG TCGGCACCGT CGTTCGCGAA CTGGTCGACA 
CCTACGGGCC CCAGGGCGTC ACCATTGGCA TGCACGCTCA CAACGATTGT GGCATGGCCG 
TCGCCAACTC CCTCACGGCC GCGCAATACG GAGCCGGATT GATCCAAGGA ACCGTCAACG 
GAATTGGTGA ACGCACCGGC AACGCCGATC TATGCGCCAT TGTCCCCAGC CTCGCTCTGC 
ACGTACAAGC ACAGCTACAC TGTCGAGCCT CACTCGCAAC GCTCACTTCG CTCAGTCGAT 
TCGTCGACGA AGTTTTGAAC CAAACACCCA ACCACGCCGC ACCCTTTGTC GGATCTTCCG 
CCTTTGCACA CAAGGGAGGC TTGCACGTGG CGGCCAGTAA GTCCATTTCA GTGTTTGACG 
GCTGGTGCTA GTGGTCGTCT TTGTCCAGCC GTGTGTACCG TGATCGTGTC TTTCGTTGCA 
CTCACGCCGT AACTCTATTC CCTTCACTTG TTCTACCCAG TGGAACGATC TCCCTTATCG 
TATCAACACA TTGAACCCGA ATTGGTCGGC AACGAACAGC GTATACTGAT TTCAGAACTA 
TCCGGGCGGC AAAACATCCT CGGTAAGATG CAACAAGCCG GTGTCGATTT GGGGACTTCG 
GGGAGTGACC GCGCCGTTGC GATTCTCAAT CGGGTCAAAA CCCTCGAAGC GCAGGGGTAC 
ACCTTTGAAG GGGCCGAAGC CAGTGTGCAT TTGATGATTC TACACGCCAC GAAAGGATAC 
TGCCCACCCT TTCAGGTACT GGACTACTCT GCACAAGTGT ACGATGCCAA TATTGACAGT 
GCGACCAGAG TATTGCGACA CACGGAATCG CCGGATACCG ATCCGACCGA TTCGAAAAAG 
CCCCGCAAGG CTCCCGGGTT TGGTCCCACG GCACGCGCCA CCGTCAACGT CCGAACGATG 
CGTCCAATCG AGGATGGTTT GGAATCGTAC CTGGCCAACC TGTCGCCGTA CCAGGACCGA 
CTTGAAGTCA GTGACGGCAA TGGCCCGGTC GATGCGCTCG CCAACGCACT GATGCGCGCA 
CTCCAACCCG TCCATCCCAT TCTTCAACAC GTGGAGCTAG TCGATTACAA GGTCCGCATT 
TTGGACGCCG AGAACGCCAC GGGTGCCACC ACCCGGGTCA TGATCGAATT TCGCAACAAC 
TCCGACGGAG ACCAGGAAAC ATGGACTACC GTTTCCGTGG ATACCAACGT GATCTCAGCC 
AGTCTCAACG CACTCGTGGA CGGTTTTGAA TATGCCCTGA TTGAACACGG TGAAAGCTGC 
ATGCTGTGTC ACTTGGACGA TATGTAA 

 

Protein sequence

MPIHRHVRDG TQGESVSASV DDKLKITRRL VAFGVDFVEA GWPGSNPKDA AFFTRAKTDL 
THAERDKLVA FGSTRRKRVR ANEDPQVQAL LESQAPTVCI VAKAHAWQVT EILRATLDEN 
LDMIRDTVAC LVAHGRVVMV DLEHALDGYA TDPDYVHACC RAAVDGGASV LVACDTNGGT 
MPWRVGTVVR ELVDTYGPQG VTIGMHAHND CGMAVANSLT AAQYGAGLIQ GTVNGIGERT 
GNADLCAIVP SLALHVQAQL HCRASLATLT SLSRFVDEVL NQTPNHAAPF VGSSAFAHKG 
GLHVAAMERS PLSYQHIEPE LVGNEQRILI SELSGRQNIL GKMQQAGVDL GTSGSDRAVA 
ILNRVKTLEA QGYTFEGAEA SVHLMILHAT KGYCPPFQVL DYSAQVYDAN IDSATRVLRH 
TESPDTDPTD SKKPRKAPGF GPTARATVNV RTMRPIEDGL ESYLANLSPY QDRLEVSDGN 
GPVDALANAL MRALQPVHPI LQHVELVDYK VRILDAENAT GATTRVMIEF RNNSDGDQET 
WTTVSVDTNV ISASLNALVD GFEYALIEHG ESCMLCHLDD M