Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38271 |
Symbol | |
ID | 7203126 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | + |
Start bp | 479990 |
End bp | 480516 |
Gene Length | 527 bp |
Protein Length | 162 aa |
Translation table | |
GC content | 60% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182235 |
Protein GI | 219123861 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCGG ATCCGTCGCC ATGGGGGCTT GTCAAGGTCC CCACCATCCC ATCTCCCAGT CTGCATAGTC GTCAAGGCGG TTTCCCAATC CATACAGCAC ATATACACAA GGAACAGTTA CAGTACCGGC CATGCTTGCC CCGCGATTAT CCCGAATTGT CCTCATGGTC CGCGGTGCGC AAGGCGTGGC GTCGGCCGTG GAGTTTTACC ACGGCGCCCT GGGACTACCG GTGACAAGGC TGACGGACGA CTGGGCCGAA CTCGACGTGG GCGCGCACGT CTCCTTGACG TTGCAGGCTG TACACGGCAT GGAAGCTCAA CTGACGACGG GATATTCCCC CCTGCTCACG CTCCAAGTCG ACAGTATGGA CGATACCGTT TCAGCTTGTG CACAAATGGG AGGGCACCTG GACGGACCGA TACAGTATCC CGCGCACGGC AAGGTGGCGG CTCTACGAGC ACCCGACGGA CACATGATTG GTCTGTACGA ACCGAACCGT GTGGGGGGTT CTCGCAGCGA CGAATAA
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Protein sequence | MDADPSPWGL VKVPTIPSPS LHSRQGVTVP AMLAPRLSRI VLMVRGAQGV ASAVEFYHGA LGLPVTRLTD DWAELDVGAH VSLTLQAVHG MEAQLTTGYS PLLTLQVDSM DDTVSACAQM GGHLDGPIQY PAHGKVAALR APDGHMIGLY EPNRVGGSRS DE
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