Gene PHATRDRAFT_38271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38271 
Symbol 
ID7203126 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp479990 
End bp480516 
Gene Length527 bp 
Protein Length162 aa 
Translation table 
GC content60% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182235 
Protein GI219123861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCGG ATCCGTCGCC ATGGGGGCTT GTCAAGGTCC CCACCATCCC ATCTCCCAGT 
CTGCATAGTC GTCAAGGCGG TTTCCCAATC CATACAGCAC ATATACACAA GGAACAGTTA
CAGTACCGGC CATGCTTGCC CCGCGATTAT CCCGAATTGT CCTCATGGTC CGCGGTGCGC
AAGGCGTGGC GTCGGCCGTG GAGTTTTACC ACGGCGCCCT GGGACTACCG GTGACAAGGC
TGACGGACGA CTGGGCCGAA CTCGACGTGG GCGCGCACGT CTCCTTGACG TTGCAGGCTG
TACACGGCAT GGAAGCTCAA CTGACGACGG GATATTCCCC CCTGCTCACG CTCCAAGTCG
ACAGTATGGA CGATACCGTT TCAGCTTGTG CACAAATGGG AGGGCACCTG GACGGACCGA
TACAGTATCC CGCGCACGGC AAGGTGGCGG CTCTACGAGC ACCCGACGGA CACATGATTG
GTCTGTACGA ACCGAACCGT GTGGGGGGTT CTCGCAGCGA CGAATAA
 
Protein sequence
MDADPSPWGL VKVPTIPSPS LHSRQGVTVP AMLAPRLSRI VLMVRGAQGV ASAVEFYHGA 
LGLPVTRLTD DWAELDVGAH VSLTLQAVHG MEAQLTTGYS PLLTLQVDSM DDTVSACAQM
GGHLDGPIQY PAHGKVAALR APDGHMIGLY EPNRVGGSRS DE