Gene PHATRDRAFT_38213 details

Gene Information

• Locus tag: PHATRDRAFT_38213
• ID: 7203101
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 345907
• End bp: 348273
• Gene Length: 2367 bp
• Protein Length: 479 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002182203
• Protein GI: 219123795

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0083412
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGACA TTAGCGATAC GGCATCCGAT GACCAGAAGG ACACGGAGTA TGTGAGTAAC 
AGTGGGACCA TCAAGTTCAA AGGAAATGAG GATGAATGGC GTACCTGGAA AGGGAAGACG 
ATTGCGACGG CAATGCAACA TCGCTTCTAC CAAGCGTTAT TCATGCAGGA AAGCCTTGCA 
ACCATGGAAG AGGTCAATGC AGGGACTGCA AGCAAGTCGA CGCGGAAAGC ATTCTTGAGA 
AACGTACAGG CGTACGCTCA TTTGGCACTG TGCTGCGAAA AGACCGCATA TTCGTACGTC 
GAAAATGCGG TGACAGAACG AGCGCCGATG GGAGATGCCT ACGAAGCGTG GAAGAAACTG 
TGTGAAAGGT ACGAACCGAA AGAAATCGAA TCGGACTACA CAAGTATTGA ACATTCATTT 
AAGGACTGTA CTATTGGCAG TATAAATGAA AATGTGGAAG AGTGGTTTCT GGAGCTGGAG 
TACTGGAATA CCCGTATGGG TAAGATCAAG CAGTCCTACA TGCGCGATGA CCTTCAGATG 
AAGGCACATA TAATTGACCA ACTCCCCGAG GCCTATGAGG CAGTGAAAGT CAAGTTGAGT 
GGAGCATACA CGACCACCCC AATGGAGACG TTTAAGAGGA TCATTTTAGA CTTCTGGAAG 
AGGCACAGTA AGAGTGACAA TAACAAAGTG ATGTCTCATT CTGAAGTGAA AGAAAAGTGT 
GGTCACTGTA GGAAAGCAGG GCATACACAA GACAAGTGCT GGAGCAAACC AGAAAATGAG 
CACTTGCGCC CCAACGGAAA GCAGGGCGGA AAGAACAAGA AGGACATCGA GTGTTTTAAT 
TGTGGAAAGA AAGGACATTA CAAGAATGAA TGTCAAAGTG AGAAGAAAGA CGGAGAAGGC 
GGACCAAGCC CAACCAATGA AGGAATGTTT GTTGGGGCCC ATGTTGAGCA AGAGCAGAAT 
TTGAACGCCG GTTCAAGCTG GGAACAAGTG CTAGCTGACT CCGGAGCCAG CTGTCATGTA 
TGGAATTCTG CTAACGAACT TCAGGACCAA GAGAAGATCT CAGAACAGGT CCAAGTTGGA 
AAGAGCGGTA GTTTTGTGAA TGTGACAATG CAGGGTACAG TATACTTGGA AACGAAAGAC 
GGAGCGAAGA TAAAGCTACT CAAGGTTAAG TATTCGCCAG ATTTCGAGAA ACGAATCTTG 
AGCGTTGGAT GCCTATTGGA CAAGGGCTGT TGTGTCACGG AAATGACCGC GACAAAAGTT 
GTTATCGTCT CTGCAGACAA GAAGAGGAGT ATCACGGCAG ATCGGACATC AAGCAGCAAG 
TTGTACTACT TCACCTGCAC GGTGTTGAGC GGACCGAAAA AGGAATCGAC TGAGGAGGTA 
TTTTCCAGTA CCGAACAGAA AGGGCATGTA TACGCAGTGG AAGAAGCAAA CAAACCCTAT 
GGACATACTA TTGCCCTGCC TAAAGCGGGG AGGATCACGA ATACGGCAAA ACCCCTCAAG 
GCTATGAGAA CTACGAAACA AGATGTGTTA AGCCCGACGG AAACAAGCAG TCAGTGGAAG 
TTTGCCGAGG AAGAACGCTT GATGCAGGAC AAGTATAATA CCAAAGAAGA AGAAGAAGCC 
AAAATGTCTG AGGAGCCGGA GCCGCACAAA GACAAGGGAT TTAACGAAAT GACCGGAAAT 
CCGGACCCGC GAGAAGATAT TCTGCAGGAA TATCACGATG TGCCCATCAG CAAAAACAGA 
AACGGATGGA ACGCGATGGA AAAGCCGAGT ATCCAGGACC GAAAGGGTTT AGGAGGGCTT 
ATCAAAAGGA ACAGCGTACC CACCAGAGTT GGTAACCGCA AGAGTTTCAA ATGGAAACAA 
GCAATTTTTG ACATCATGGT AAACCTGGGA ATTGCTTTGG GCTTTATCTA TTGGCATGCA 
ATGAAGGATT TAGACAAATT CAGAAAGTTA CTTGGAGTAC ACTGCATGGC TGTAAACAAC 
GAGATTGGGC AATACATTGG AGTCAAAACA ACAGAGTATG AGAAAGAATT CATCCGGGAC 
CACGAACTAG AGATCTGGGA GGAAGCCAAG ATTTTTAGCA TTCCTGGATA CCACGAAGAA 
TTTCACAAGG GAAATGAAGG ACAATCAGTA TCGAAGAAAC AGTCCAGTTT ACTTATTGGA 
AAAATTGTAT TTTTGGTAAG CAAATGGATC ACGGACTGCA TGACTGCACT CCGCGAGCTC 
TCCACGTTGC TGGACACAGT AAAGTGGAAA ATGAAATCAT CGAACAGGGA GGATGTCAAG 
TTTGGCAGTC AAGTGGGACA TGTCCGGCAG AATGCGACAT GTCACACAAA GAGATTTGAA 
AAAGAGCGAG CTCTCATCTC GAGCTAA 

 

Protein sequence

MDDISDTASD DQKDTEYVSN SGTIKFKGNE DEWRTWKGKT IATAMQHRFY QALFMQESLA 
TMEEVNAGTA SKSTRKAFLR NVQAYAHLAL CCEKTAYSYV ENAVTERAPM GDAYEAWKKL 
CESINENVEE WFLELEYWNT RMGKIKQSYM RDDLQMKAHI IDQLPEAYEA VKVKLSGAYT 
TTPMETFKRI ILDFWKRHNV LSPTETSSQW KFAEEERLMQ DKYNTKEEEE AKMSEEPEPH 
KDKGFNEMTG NPDPREDILQ EYHDVPISKN RNGWNAMEKP SIQDRKGLGG LIKRNSVPTR 
VGNRKSFKWK QAIFDIMVNL GIALGFIYWH AMKDLDKFRK LLGVHCMAVN NEIGQYIGVK 
TTEYEKEFIR DHELEIWEEA KIFSIPGYHE EFHKGNEGQS VSKKQSSLLI GKIVFLVSKW 
ITDCMTALRE LSTLLDTVKW KMKSSNREDV KFGSQVGHVR QNATCHTKRF EKERALISS